Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01978 ATGGCAAATGCTGCTGCTGCTGCTTCTTCTTCTTCTTCCTTCTCCTCTTTTTGGGTAATTCTTGCTCTGGGCCTCTCTTTTTTTACTACCTGCACTTCGGCCCACATTGAGTTGGGCTCCAGGTTGTTGTCTAGCAAGGCCCAAACTTGGGTCTCTGAAAATGGCACATTTGCTTTGGGGTTCACTCCAGCTGATAGTGATAATCGATTGTTTGTGATTGGCATTTGGTTTGCACAGCTTCCAGGAGACCCAACTCTAGTTTGGTCACCCAATAGAGACACTCCTGTATCCCAAGATGCAACATTGGAGCTTGACACCACTGGCAACCTAGTTCTCATGGATGGAGGCATCACAGTGTGGACCTCAAACACCTCAGGTGCTGGTGTACAAGCAGCAGTCATGGCAGAATCTGGCAACTTCATCCTCCAGAACGCGACCAGCCACCCTGTGTGGCAGAGTTTTTCTCAACCTTCCGACACTCTCCTCCCCAATCAGCTTCTAACAGTGTCTTCAGAACTAACTTCGTCAAAGTCTTCCTCTCATGGTGGCTACTATTCTCTCAAAATGCTTCAACAGCGTACTTCCTTAAGCCTTGCTCTCACTTACAATCTTCTTGAGACTTACCAAGCCTCAGATGAATCATACACCAACTATTCATATTGGAACGGCCCTGATATCTCCAATGTGACTGGGGAGGTTATAGCAGTTTTAGACAATGCTGGGAGCTTTGGGATTGTGTATGGAGACTCATCTGACGGAGCAGTATATGTGTACAAGAATGATGGTGACGATGCAGGCTTGTCTTCTGCAGTTCGTCAATCTGCCCCATCAACTGTTCTGAGGAGACTAACATTGGAAAAGAATGGCAATCTGCGGTTGTATCGATGGGACGAAGTGAATGGCTCAAGCCAGTGGGTGCCACAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGCGTTTGTGGCAATGGTGTTTGCAATTTGGACAAAAGCAAGACAAAAGCCACTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGTAGGGATGGACTGTGCTATGAGAATTCATCTCTTGTGGGAAAATGCAATGACAAGCATGAAAACCTGACATCCCAGTTTAGGATTTCAACGGTGCAGCAAACCAACTATTACTTTTCTGACTTTTCAGTTATAGCTAACTACAGTGATATTTCAAATGTGTCAAAATGTGGGGATGCTTGCTTGTCAGAATGTGATTGTGTGGCTTCTGTTTATGGGCTAAATGAGGAGAGACCATATTGTTGGGTGTTGAGGAGCTTGAGTTTTGGTGGTTTTGAGGATACAAGCTCAACTTTGTTTGTGAAGGTCAGAGCAAATGGGTCATGGAGTCCAGAAGGCCAAGAAGGAGGGTCTAACAATAGCACTTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCCACTGTTGTGAGCATGGTAGTTCTCATTGTTTTGCTGAGTTTATTACTGTATTACAGTGTTCACAGGAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTGATCTTATCTGGTGCTCCAATGAATTTCACCTACCGTGATTTGCAGATTAGGACATGCAACTTTTCAGAGCTTCTAGGAACAGGTGGATTTGGGAGTGTCTATAAAGGAAGCCTGGGAGATGGTACTCTAGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCTCATGGAGAGAAGGAATTCATCACTGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGCGGCTATTGTTCTGAGGGATCACATAGATTAAACGGGGCAGTTGATGAAGAAGAGCTAACGAGAGCTCTGAAAGTTGCATTTTGGTGCATCCAAGATGAGGTATCCATGCGACCAACAACGGGGGAAGTGGTAAGACTGTTGGAAGATTCGATGGACATTAATATGCCACCTATGCCACAAACAGTGCTAGAGTTAATTGAGGAAGGCTTAGACCATGTATACAAAGCTATGAAAAGAGAGTATAATCACTCCAGCTCATTCACTCTTACCAGCCATCTCACATCTCGTGCCACATGTACGATGGAGAAGATGCGTCACGCGGAGGAGCTGGTGAGGGAGTTTCTGGTGTTCCGCGGCTTCACCAACACCCTCGAATCATACGAGACCGAATTGCGCACCGACATCGGCAAGGGCTTCGAGGTCGACAAGATCCTCGACCTAATCTTCTCCGTCTACGTTCCCAAGTTCCACGCCGATAAGCTTGTCGCGCTTCTTGGGTTCTTCAAACACTACCTCTCTTCCTCCTCCGACACGCCGCTCGTGTCCACACTCTCGAAGTTGGAGACTTCTATTCTACGGTTTTATGTCGTCCACGCCGTGCAGTGCAACCGCAACGACAAGGTCGTTGAGTTCTTCGCGTTCTACGGCACCGAATTGTTGCAGAGGTCGCAAGATTGGACTCACTGGTTTGCAATTCCTTACAAGAAGAACCCGCACATGGATCCCGAGTTTCGGGTTTTTTTCTCCAAGGAGTGGTATCAGGCTTTGCATCTTTCTTCTAGAAACTTCTTCAGCGAGGTTTTCAATGCTACTCATATCCTTCACATTAATTCTGTTCATAGTTCTAAATTGGCTTTGCTTGATGAGAAAGAGGAACAGTTACGTCAATTTAGAAGTATGGAAGGGAGTACTGGTTCATCAAGCAATTTGCGTGAAGAAAGTGCTCTTGCGGTGAAAAGTTCTCCGGATGTTTTTCCAACTAGCATTTCACAAGTAGGTCAGATCGAGATTAGCCAAGATTTAGCTATGGGTGAACTCGGAAATGTTCATTCTGAGTTTATTGGCTCCACATCTTGTGATGATTCAGCTTTTCTATCGAATGACTGTCTGAGGAATAGCGGAGCTGACAATGCCAGTCTAAAAGAAAACGACGGGGATGAAGATTTTGCTGAGGTCAAAGTAGAGCACCAGGAGACATTTTTGGGGCACACCAGTCCAATCAGTCGATGTCGCTTCTCTGCATCTGGAAACAATATTGCCAGTGCTTCCCTGGATGGAACTATGAAGGATATGGACATATGA 3093 0.4562 MANAAAAASSSSSFSSFWVILALGLSFFTTCTSAHIELGSRLLSSKAQTWVSENGTFALGFTPADSDNRLFVIGIWFAQLPGDPTLVWSPNRDTPVSQDATLELDTTGNLVLMDGGITVWTSNTSGAGVQAAVMAESGNFILQNATSHPVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYSLKMLQQRTSLSLALTYNLLETYQASDESYTNYSYWNGPDISNVTGEVIAVLDNAGSFGIVYGDSSDGAVYVYKNDGDDAGLSSAVRQSAPSTVLRRLTLEKNGNLRLYRWDEVNGSSQWVPQWAAVSNPCDIAGVCGNGVCNLDKSKTKATCTCLPGTSKVGRDGLCYENSSLVGKCNDKHENLTSQFRISTVQQTNYYFSDFSVIANYSDISNVSKCGDACLSECDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVRANGSWSPEGQEGGSNNSTSDGMGSAKEKAVIIPTVVSMVVLIVLLSLLLYYSVHRKRTLKREMESSLILSGAPMNFTYRDLQIRTCNFSELLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLNGAVDEEELTRALKVAFWCIQDEVSMRPTTGEVVRLLEDSMDINMPPMPQTVLELIEEGLDHVYKAMKREYNHSSSFTLTSHLTSRATCTMEKMRHAEELVREFLVFRGFTNTLESYETELRTDIGKGFEVDKILDLIFSVYVPKFHADKLVALLGFFKHYLSSSSDTPLVSTLSKLETSILRFYVVHAVQCNRNDKVVEFFAFYGTELLQRSQDWTHWFAIPYKKNPHMDPEFRVFFSKEWYQALHLSSRNFFSEVFNATHILHINSVHSSKLALLDEKEEQLRQFRSMEGSTGSSSNLREESALAVKSSPDVFPTSISQVGQIEISQDLAMGELGNVHSEFIGSTSCDDSAFLSNDCLRNSGADNASLKENDGDEDFAEVKVEHQETFLGHTSPISRCRFSASGNNIASASLDGTMKDMDI* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01978 1030 SMART blect_4 41 157 IPR001480 -
Lapu7g01978 1030 SUPERFAMILY WD40 repeat-like 995 1026 IPR036322 GO:0005515
Lapu7g01978 1030 Pfam S-locus glycoprotein domain 276 344 IPR000858 GO:0048544
Lapu7g01978 1030 Pfam D-mannose binding lectin 85 172 IPR001480 -
Lapu7g01978 1030 Gene3D - 32 156 IPR036426 -
Lapu7g01978 1030 Pfam Protein kinase domain 540 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01978 1030 ProSiteProfiles Bulb-type lectin domain profile. 35 155 IPR001480 -
Lapu7g01978 1030 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 997 1030 - -
Lapu7g01978 1030 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 172 IPR036426 -
Lapu7g01978 1030 ProSiteProfiles Trp-Asp (WD) repeats profile. 997 1030 IPR001680 GO:0005515
Lapu7g01978 1030 SMART tyrkin_6 537 707 IPR020635 GO:0004713|GO:0006468
Lapu7g01978 1030 SUPERFAMILY Protein kinase-like (PK-like) 515 604 IPR011009 -
Lapu7g01978 1030 FunFam serine/threonine-protein kinase PBS1-like 505 608 - -
Lapu7g01978 1030 ProSitePatterns Protein kinases ATP-binding region signature. 543 566 IPR017441 GO:0005524
Lapu7g01978 1030 FunFam Serine/threonine-protein kinase 37 155 - -
Lapu7g01978 1030 Gene3D Phosphorylase Kinase; domain 1 501 607 - -
Lapu7g01978 1030 PANTHER OS07G0415500 PROTEIN 606 656 - -
Lapu7g01978 1030 CDD B_lectin 41 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01978 Lapu-Chr7 36023623 36037165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01978 383 607 Receptor kinase-like Gene Family AT4G23190 29.630 2.02e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu7g01978 Pkinase 2.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01978 - - gmx:100775424 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01978 7 36023623 36037165 Lapu7g01978 7 36023623 36037165 ECH