Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01972 ATGATTCGCACGATACAAAACACAGTGAAGTCAAGGAAAATGACGGTTTTTTGGAGCGTGTTTTGTGGGGAATCCGGTTGTTCGGAGGCGGGAAGAATGCCTTGCAGTTATGACTTTAAAATTCTCGTTGATCCTTCTACCTGTGTCAACCATTTGTTGATCTCTTGCTTTGATGTGTTATTGCTTATCATGCTTGCATTCATTATGATCCAGAAGTCAACATTAAAACCATCTCGGGGTATAGTACGGGTGCAAAGATATTCATATTTGCAGATAGTTTCTTTCATAGCTAATGGTGTTCTTGGGTTGGTGCATTTGTGCTTAGGCATTTGGGTTTTAGAGGAGAGGTTGAGGAAAACCCAAACTATGTTGCCTTTGGATTGGTGGTTGCTAGAAATCTTTCACGGATTAACATGGTTGTTAGTGAGTTTATTGTTAAGTCTTAAGTTGAAACAACTTCCAGCAAGATGGTCAAGGCTTTATTCTTTTCTAATCTTCTTGATTTCTGGTATTTTCTGTGCTTCATCCTTGTTTTATGCAATTAGTAGCAGAGAACTATCCCTTATGATAGCTTCGGACATTCTATCTTTTTTGGGGGCGATGTTATTGTTATCATGCACATATAAGGAATCAAGTTATGGAGACACGAACAGAGAAACTGATGAAAGTCTTTATGCCCTCTTGAATGGTCAGTCTAATAGAAAAGAATCTATTACATATGTAACACCGTTTTCCGAAGCGGGATTCTTCAATAGAATGTCATTTTGGTGGTTGAATCCATTGATGAAAATGGGTAAAGAGAAAACACTTCAGGATGAAGACATTCCAAGGTTACGGGAGGAGGATCGAGCAGAAAGTTGTTATTTTCTATTTCTGGACCAACTGAACAGAAAGAAACAAAAGGATCCATCCTCGCAACCATCAATTTTGAGGATAATACTTTTGTGTCATTGGAGAGAAATTTTAGTATCAGGATTCTTTGCATTGCTTAAGGTACTTGCAATGTCTTCAGGACCTCTTCTTTTGAATTCTTTTATATTGGTTGCTGAGGGTAATGAGAGTTTCAAATATGAAGGTTTTCTGTTGGCAATATCGCTTTTCTTTACAAAATCCATTGAATCCCTTTCTCAAAGGCAATGGTATTTCCGATGCAGACTTATTGGTCTAAAAGTTAGGTCATTGCTAACTGCAGCCATTTATAGAAAGCAATTGAGGTTATCCAATTCTTCTAGATTGATTTACTCTGGTGGTGAGATAATGAATTATGTCACTGTGGATGCTTATAGAATTGGTGAATTTCCCTATTGGTTTCACCAGACCTGGACAACTAGCTTCCAGCTCTGTATCTCGTTAGTAATACTTTTTCGTGCTGTTGGGCTGGCAACAATTGCCTCCTTGGTTGTGATAGCAATCACTGTTCTTTGCAATACTCCACTTGCAAAGTTACAACATAAGTTTCAAAGCAAACTTGTGGTGGCACAAGATGAGAGATTGAAGGCTTATTCTGAGGCTCTTGTGAATATGAAGGTGTTAAAGTTGTATGCATGGGAAACCAATTTTAGAAATGCTATAGAGAGATTAAGGAACGAGGAGCTTAAATGGTTGTATGCAGTGCAATTAAGAAAGGCATACAACACCTTTCTCTTTTGGTCCACCCCTGTTTTGGTCTCTGCTGCTACCTTTGGAGCTTGCTACTTTCTTAATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCTACTTTGCGCCTTGTTCAAGATCCAATTAGAACCATCCCTGATGTTATTGGGGTGGTCATTCAGGCAAAAGTTGCGTTTACTCGGATTGTAAAATTCCTGGAGGCACCTGAACTGCAGAGTGCAAATGTCACAAAAAGGTGCCTCAATGACACTATGAGGGGTTCAATAACAATCAAGTCTGCCGATTTTTCATGCGAAGATAATGTATCAGAGCCAACACTGAGAAAGATAAATTTGGAGGTTAGACCAGGGCAAAAGGTAGCCATTTGTGGAGAGGTTGGCTCAGGCAAATCGACTCTCTTAGCAGCGATCCTCAGAGAAGTTCGTATGACTCAAGGAGAAATGGAAGTGTATGGAAAGTTTGGTTATGTTTCTCAAACAGCATGGATACAATCAGGTACAATACGTGAGAATATATTGTTTGGGGCAGCCATGGATGCTGAAAAATATCAAGTAACACTTCATAGGTCTTCACTATTGGAGGACCTTGAGTTGTTTCCCCATGGCGATCTGACTGAAATAGGAGAGAGAGGAGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTGGCTCGTGCACTATATCAAAATGCTGATATATATATCTTGGATGACCCATTCAGTGCTGTTGATGCACATACCGCAACAAATTTGTTTAATGAATACATAATGAAAGGACTTGTTGGGAAAACAGTCTTGCTCGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTGTTTTGTTGATGTCAGATGGGGAAATTATAGAAGCTGCTCCATATCACCATTTGTTGAGCTCAAGCCAAGAATTTCAGAACCTTGTGAATGCCCACAAAGAGACTGCTGGTTCTGACCGGCTAGTGGATGTCACTTCTTCCCGGAACCATTCAAGTAGTTCTAGAGATATCAGAAAAACATCTATGGAGCAACACTACGAAAAATCAAAAGGTGATCAATTGATTAAGCTAGAAGAGAGAGAAAAAGGAGACCATGGTTTCAAACCGTACATACAGTATCTGAATCAGAACAAAGGATATATATACTTCTCTTTGGCTGTTTTCTCTCAACTAACATTTGTGATTGGCCAAATATTACAAAACTCATGGATGGCCGCTAGTGTTGACAATCCTCGAGTCAGCTCCTTGAAATTGATTGTAGTTTACTTGTTGATTGGAGTTATTTCAGCAATATTCTTGTTGATTAGAAGTCTTTCTACAGTGGCTTTGAGCCTTCAATCATCAAAGTCATTGTTTTTACAGCTACTGAACTCCCTTTTTCGTGCCCCCATGTCATTTTATGACTCCACTCCTTTAGGACGGATACTAAGTAGGGTCTCCTCAGATCTCAACATTGTAGACCTTGATATTGCATTCGGCTTTATTTTTGCTGTGGGAGCCACTTCAAATTGTTATGCTAATCTTACAGTTTTAGCAGTTGTTACTTGGCAAGTCTTGTTTGTCTCAATCCCAATGATTTATTTTGCAATCCGCTTGCAGAAATATTACTTTGCTTCTGCGAAAGAACTGATGCGGATGAATGGCACCACAAAATCCTTTGTAGCTAACCATCTTGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTTCAGAAAAGTCTTGATCTAATTGACGTCAATGCTAGTCCTTACTTCCATAGTTTTGCAGCAAATGAGTGGTTGATTCAACGATTAGAAATAGTCAGCGCTGTTGTTCTTGCATCTGCTGCACTTTGCATGGTTGTACTTCCGCCTGGAAGTTTCTCCTCTGGATTTATTGGCATGGCTCTCTCCTATGGCCTTTCACTTAACATGTCCTTGGTATTTTCAATTCAAAATCAATGCAATATAGCGAACTATATAATATCAGTGGAGAGGCTAAATCAGTATATGCATATACCAAGTGAGGCCCCAGAAGTTATAGAAGGAAATCGTCCTCCTGCTAATTGGCCAGTTGCTGGTCGAGTACAAATAAATGAATTGCAGATACGTTACAGACCTGATGCACCACTAGTACTGCGTGGGATCACATGCACAATTGAAGGAGGGCACAAAATTGGTATTGTTGGCAGAACAGGCAGTGGAAAGTCCACTCTTATAGGTGCCTTATTCCGTCTGGTAGAGCCAGCTGGTGGAAAAATAGTTGTTGATGGCATAGACATTTGTTCTATTGGACTTCATGACTTGAGGTCACGCTTTGGTATCATACCCCAAGATCCTACTCTTTTTAATGGCACAGTTAGATACAATCTGGACCCCTTATCTCAACACTCTGATAAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTACAAGAGGCTGTCCAAGAGAAAGAGGAGGGATTAGGATTAGACTCTTCAGTTGTCGAAGCTGGAGCAAACTGGAGCATGGGACAACGACAACTATTTTGTTTAGGGCGTGCTCTTCTACGCAGAAGTCGCATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACCGATTTGATTTTGCAGAAAACCATTAGGACGGAGTTTGCAGATTGTACAGTTATCACGGTAGCTCACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTGCCATTAGTGATGGAAAACTGGTGGAGTATGATGAGCCAATGAACTTGATAAAGAGAGAAGGATCACTGTTTGGGAATCTTGTAAAAGAATATTGGTCTCATTTTCAGTCTGCAGAATCTCAATGA 4485 0.4009 MIRTIQNTVKSRKMTVFWSVFCGESGCSEAGRMPCSYDFKILVDPSTCVNHLLISCFDVLLLIMLAFIMIQKSTLKPSRGIVRVQRYSYLQIVSFIANGVLGLVHLCLGIWVLEERLRKTQTMLPLDWWLLEIFHGLTWLLVSLLLSLKLKQLPARWSRLYSFLIFLISGIFCASSLFYAISSRELSLMIASDILSFLGAMLLLSCTYKESSYGDTNRETDESLYALLNGQSNRKESITYVTPFSEAGFFNRMSFWWLNPLMKMGKEKTLQDEDIPRLREEDRAESCYFLFLDQLNRKKQKDPSSQPSILRIILLCHWREILVSGFFALLKVLAMSSGPLLLNSFILVAEGNESFKYEGFLLAISLFFTKSIESLSQRQWYFRCRLIGLKVRSLLTAAIYRKQLRLSNSSRLIYSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVGLATIASLVVIAITVLCNTPLAKLQHKFQSKLVVAQDERLKAYSEALVNMKVLKLYAWETNFRNAIERLRNEELKWLYAVQLRKAYNTFLFWSTPVLVSAATFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFTRIVKFLEAPELQSANVTKRCLNDTMRGSITIKSADFSCEDNVSEPTLRKINLEVRPGQKVAICGEVGSGKSTLLAAILREVRMTQGEMEVYGKFGYVSQTAWIQSGTIRENILFGAAMDAEKYQVTLHRSSLLEDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYILDDPFSAVDAHTATNLFNEYIMKGLVGKTVLLVTHQVDFLPAFDSVLLMSDGEIIEAAPYHHLLSSSQEFQNLVNAHKETAGSDRLVDVTSSRNHSSSSRDIRKTSMEQHYEKSKGDQLIKLEEREKGDHGFKPYIQYLNQNKGYIYFSLAVFSQLTFVIGQILQNSWMAASVDNPRVSSLKLIVVYLLIGVISAIFLLIRSLSTVALSLQSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLNIVDLDIAFGFIFAVGATSNCYANLTVLAVVTWQVLFVSIPMIYFAIRLQKYYFASAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFQKSLDLIDVNASPYFHSFAANEWLIQRLEIVSAVVLASAALCMVVLPPGSFSSGFIGMALSYGLSLNMSLVFSIQNQCNIANYIISVERLNQYMHIPSEAPEVIEGNRPPANWPVAGRVQINELQIRYRPDAPLVLRGITCTIEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIVVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDKEIWEVLGKCQLQEAVQEKEEGLGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLIKREGSLFGNLVKEYWSHFQSAESQ* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01972 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1209 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g01972 1494 FunFam Multidrug resistance-associated protein 1 618 881 - -
Lapu7g01972 1494 Gene3D - 632 866 IPR027417 -
Lapu7g01972 1494 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g01972 1494 SUPERFAMILY ABC transporter transmembrane region 933 1226 IPR036640 GO:0005524|GO:0016020
Lapu7g01972 1494 CDD ABC_6TM_ABCC_D2 928 1221 IPR044726 GO:0140359
Lapu7g01972 1494 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Lapu7g01972 1494 CDD ABC_6TM_ABCC_D1 323 610 IPR044746 GO:0140359
Lapu7g01972 1494 FunFam ABC transporter C family member 5 895 1227 - -
Lapu7g01972 1494 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 244 1482 - -
Lapu7g01972 1494 Pfam ABC transporter 1263 1413 IPR003439 GO:0005524
Lapu7g01972 1494 CDD ABCC_MRP_domain1 637 837 - -
Lapu7g01972 1494 FunFam ABC transporter C family member 10 305 618 - -
Lapu7g01972 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1236 1475 IPR027417 -
Lapu7g01972 1494 SMART AAA_5 1272 1466 IPR003593 GO:0016887
Lapu7g01972 1494 SMART AAA_5 664 837 IPR003593 GO:0016887
Lapu7g01972 1494 FunFam ABC transporter C family member 3 1229 1483 - -
Lapu7g01972 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1482 IPR003439 GO:0005524
Lapu7g01972 1494 Pfam ABC transporter transmembrane region 930 1172 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g01972 1494 Pfam ABC transporter transmembrane region 322 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu7g01972 1494 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 639 860 IPR003439 GO:0005524
Lapu7g01972 1494 Pfam ABC transporter 655 789 IPR003439 GO:0005524
Lapu7g01972 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 860 IPR027417 -
Lapu7g01972 1494 SUPERFAMILY ABC transporter transmembrane region 309 615 IPR036640 GO:0005524|GO:0016020
Lapu7g01972 1494 Gene3D - 1230 1482 IPR027417 -
Lapu7g01972 1494 CDD ABCC_MRP_domain2 1244 1466 - -
Lapu7g01972 1494 Gene3D ABC transporter type 1, transmembrane domain 894 1227 IPR036640 GO:0005524|GO:0016020
Lapu7g01972 1494 Gene3D ABC transporter type 1, transmembrane domain 293 619 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01972 Lapu-Chr7 35959382 35984393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01972 618 850 Calmodulin-binding Proteins AT2G36910 30.645 9.74e-26 114