Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01970 ATGCCTTGTCCCTCTCTTCTACCATTTTTCCCCTTCTTGATCTTCTTCCTCCTCCTCTTCCCCTCGCTACTCTCACTCCCTTTCTTCCCCTCCGACAACCTCACCCTCTACGGTGACGCCTTCTACTCCCACAAAGCCATCACTCTCACCACCCACCAACCCACCTGCTCCTCCTCCTCCATCGGCGGAGCCTTCTTCATCTACCCCCTCAGTTTTCTTGACCCACAAACCAACTCCACCGCCTCCTTCTCCTCCCGCTTCTCCTTCTCCATTCTCTCCTCCCCCTCATGCCCCCCCGGCGATGGCCTCGCCTTCCTCATCGCCTCCTCCACCCATTTCCGCGCCCTTTCCATGGGCCTCCCCCAACCCTCCCCCTCCTCCTCCTCCTCCTTCTTCGCCGTCGAATTCGACACTACCTTCGACCCCTCCCTCGGCGACATCAACGACAACCACGTGGCTCTTGACGTCAACAGCGCTTCCTCCTTCGCGTCCGTCGATGCCTTGTCCCGCGGCATTGACCTCAAGAGCGGCAAACTCATTACTGCATGGGTCGAGTACCGCGATTCAATCAAGATGGTACGTGTCTGGCTCGCTTATTCCTCCACCAGACCTCCCACTCCCATTCTTGCTTCCCAAATAGACCTCTCCGAGAGACTTGAAGACCTCATGCACGTTGGTTTCACTGCCTCCAATGGGGAGGGATCAAGTGATTACCTTGTTCATCATTGGCAGTTCACGACTTTTGGCCATGACTCTCGCTCCATGGACGTGGTCGATGAGGGTGAGTGTTTCTTGTGTTACGATGGGGATTCTACGGGTTCTGGTTCGAACACGAGGGAGAATGAGAGGAGGAAAAAGATTGGGGAGATGGCTCTTGGGTTGGGAGGGTTAGCGGCGTTTGTGGTGTCGGTTTTAGCGGCGATGGTTGTGGTGTGTGTTTTCTTGGCAAGGAAGAAAGGTGGTGTCAGGAAGAATATGGAGCAAGGGCAAAGTTGTAGGTTTCAGACGAGTAGAGTTCCGACTAGGTTGTCACTCTCGGAGATTAAGTCTGCCACAATGGGGTTCAATCGTGCTAGGCTTGTTGGGGAGGGTGCATCTGCCAAGGTTTATAAAGGGCATCTTCCCTTTGGAGGGGATGTGGCAGTGAAGAGATTCGAGAGGGAAAATGATTTGGATTGTTTGCATAACCCTTTTGCCACTGAGTTTGCTACCATGGTGGGTTACTTGCGCCACAAGAATTTGGTTCAGCTTAAGGGGTGGTGCTGTGAGGGAAATGAGTTGGTCCTGGTTTATGAGTTTCTTCCCAATGGGAGCCTCAATAAGGTTCTGCATGGGAACTTCAATTCTTCCATTGTTCTTTCATGGAGGCAAAGGGAGAATATTGTTCTTGGGGTTGCTTCTGCTCTCACCTACCTTCATGAGGAGTGTGAGAGGCAGATCATTCACAGGGATGTGAAGACCTGCAATATAATGCTTGATGCGGATTTCAATGCCAAGCTTGGGGATTTTGGGCTTGCGGAAGTGTATGAGCACAGTTCTAGAACGAGGGATGCTACTATACCAGCAGGGACAATGGGGTATCTTGCTCCTGAGTATGTTTATTCTGGTGTTCCTACGGTGAAGACTGATGTGTACAGCTTTGGAGTGGTGGTGTTGGAAGTGGCAACTGGGAGGAAGCCTGTGGAAGATGATGGCACCGTGGTTGTGGATTATGTGTGGAGCTTGTGGGAAAAGAGGAAACTGGTTGAGGGTGCTGATCCAAGATTGATGGGGAAGTTTAATGCAGTAGATATGGAAAGGATGCTACTGGTGGGGCTTCTTTGTGTTCACCCTGATGATGAGAAGAGGCCAAGAGTAAGAGAAGCAGCCAGAATTCTTAAGAAGGAAGCACCACTTCCTCTCTTGCCTCCCACTAAACCAAGGGTGAGAATTAGGCCTATTTGTCCTGATGCTACACCTGAAACGCAGTATGTTGTTGGAGATTGGCTCAGCACAGATGAGGCTCCTTATTTGACCCCCAGAAGCCAGTTTTACTAG 2037 0.5145 MPCPSLLPFFPFLIFFLLLFPSLLSLPFFPSDNLTLYGDAFYSHKAITLTTHQPTCSSSSIGGAFFIYPLSFLDPQTNSTASFSSRFSFSILSSPSCPPGDGLAFLIASSTHFRALSMGLPQPSPSSSSSFFAVEFDTTFDPSLGDINDNHVALDVNSASSFASVDALSRGIDLKSGKLITAWVEYRDSIKMVRVWLAYSSTRPPTPILASQIDLSERLEDLMHVGFTASNGEGSSDYLVHHWQFTTFGHDSRSMDVVDEGECFLCYDGDSTGSGSNTRENERRKKIGEMALGLGGLAAFVVSVLAAMVVVCVFLARKKGGVRKNMEQGQSCRFQTSRVPTRLSLSEIKSATMGFNRARLVGEGASAKVYKGHLPFGGDVAVKRFERENDLDCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGNELVLVYEFLPNGSLNKVLHGNFNSSIVLSWRQRENIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSRTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVVVDYVWSLWEKRKLVEGADPRLMGKFNAVDMERMLLVGLLCVHPDDEKRPRVREAARILKKEAPLPLLPPTKPRVRIRPICPDATPETQYVVGDWLSTDEAPYLTPRSQFY* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01970 678 SUPERFAMILY Protein kinase-like (PK-like) 340 647 IPR011009 -
Lapu7g01970 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Lapu7g01970 678 Gene3D - 24 261 - -
Lapu7g01970 678 SMART serkin_6 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01970 678 CDD lectin_legume_LecRK_Arcelin_ConA 32 249 IPR001220 GO:0030246
Lapu7g01970 678 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Lapu7g01970 678 PANTHER - 47 636 - -
Lapu7g01970 678 FunFam L-type lectin-domain containing receptor kinase VIII.1 434 644 - -
Lapu7g01970 678 Pfam Protein kinase domain 356 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01970 678 ProSiteProfiles Protein kinase domain profile. 355 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01970 678 Gene3D Transferase(Phosphotransferase) domain 1 434 631 - -
Lapu7g01970 678 CDD STKc_IRAK 361 628 - -
Lapu7g01970 678 Gene3D Phosphorylase Kinase; domain 1 317 433 - -
Lapu7g01970 678 Pfam Legume lectin domain 30 250 IPR001220 GO:0030246
Lapu7g01970 678 FunFam L-type lectin-domain containing receptor kinase S.6 321 433 - -
Lapu7g01970 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 249 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01970 Lapu-Chr7 35937890 35939926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01970 7 677 Receptor kinase-like Gene Family AT5G42120 54.208 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu7g01970 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01970 - - gmx:100783805 1033.86