Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01964 ATGGATTTGGTAGAAGGCGTCGGAGAGAGCTCCTCGCCGCCGCGCGCCTTCAGCGGTTACGGAAACTATGACGTCCGCAACGACGTCTATAACCGCCTCCTCGAAACCAGCCACGACCAAGCCGTTTCCAATCCCGAGTTCCGCGAACAGCTGGAGGCTCACTTCAATCGCTTGCCTCCGAGCTATGGACTCGATGTGAATATCGATAAAGCTGAAGATGTTCTGTTGCATCAAACGCTTCTTGCTCTGGCAAGGGACCCTGACAAGCGTCCTGTTTTCCATATACGCTTCCTCGAGAATATTTCAACTACAACAGATGGTGAAGATCAACAAATTTTAAGTACTCATTATAGCATGGGGTCATCTCATTCTCATGCAACAAATGGGGTAGCTGTACCATCTGGGAAAAGTACGATGAGGGATATTGCAAATGAATTTGAGCCTTGCTCAAAGCTTGAGGACTTAAATTTGGATGTTAGAAAGAACTCCAAGGAGACAGAAGAAAAATTTCTCGCTGACAACTTTTTTCAGAGGCATGAACATTCAAGTATCCGAGTTCATGAAATAATATTTTCTACTGTTGACAAGCCAAAGCTGTTAAGCCAGCTGTCTGCTTTGCTGTCTGATATTGGACTTAACATCCGTGAAGCACATGTTTTCTCCACAACTGATGGCTATTCCCTTGATGTGTTTGTGGTGGATGGGTGGCCAGTAGAGGAAACTGATGAATTATATGATGCTATGGAAAAAGCTGTAGCAAGAAGTGAGGGGTCATGGTCCCGTTCTTCAAATCTTCATTCAGCTGTGGAGAAAGCCCTAGCAACAGAGGGAAAATCAGGAGATTGGGAAATAGACAGGAGGTTGCTGAAGTTAGGAGAAAAAATAGCATCTGGATCCTCTGGAGATTTGTATCGTGGAGTTTATCTTGGGGAAGATGTTGCTGTTAAGGTTCTGAAATCTGAGCAATTGAATGATGCCTTAGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTGAGGCAGGTACAACATAAAAATGTTGTTCGTTTCATTGGTGCATGCACGAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGCCCGGAGGAAGTCTGTATGATTACATGCACAAAAATCATCATGTCTTGGAGCTGTCTCAATTACTAAAATTTGCAATTGATGTCTGCAAGGGTATGGCGTATTTGCACGCGAACAACATTATTCACCGAGATCTGAAGACAGCTAATTTGCTGATGGATACACACAATGTTGTTAAAGTTGCAGATTTTGGAGTTGCTCGGTTCCTAAATCAGGGGGGAGTGATGACAGCAGAAACTGGAACATATAGATGGATGGCACCAGAGGTTATAAACCATCAGCCCTATGATCAGAAAGCAGATGTATTCAGTTTTTCCATTGTACTTTGGGAATTAGTGACCGCAAAGGTACCATATGACACCATGACCCCACTACAAGCTGCTTTGGGTGTGAGACAGGGTCTGCGGCCAGAACTTCCGAAGCATGGGCACCCTAAACTATTAGAGTTGATGCAAAGATGTTGGGAAGCCATTCCAGTCGACCGTCCATCCTTTAAGGAGATAACGATCGAACTTGAAAATCTTTTGCGAGAAATGGAGAAAGATTCAGAAGCGAATGCCGTGAAGTTTTTCACGTTCCCATGTTGCACCGAGGGAAAAAAGCGTTCACAGAAGTTGTGA 1716 0.4417 MDLVEGVGESSSPPRAFSGYGNYDVRNDVYNRLLETSHDQAVSNPEFREQLEAHFNRLPPSYGLDVNIDKAEDVLLHQTLLALARDPDKRPVFHIRFLENISTTTDGEDQQILSTHYSMGSSHSHATNGVAVPSGKSTMRDIANEFEPCSKLEDLNLDVRKNSKETEEKFLADNFFQRHEHSSIRVHEIIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDELYDAMEKAVARSEGSWSRSSNLHSAVEKALATEGKSGDWEIDRRLLKLGEKIASGSSGDLYRGVYLGEDVAVKVLKSEQLNDALEDEFAQEVAILRQVQHKNVVRFIGACTKCPHLCIVTEYMPGGSLYDYMHKNHHVLELSQLLKFAIDVCKGMAYLHANNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKHGHPKLLELMQRCWEAIPVDRPSFKEITIELENLLREMEKDSEANAVKFFTFPCCTEGKKRSQKL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01964 571 ProSiteProfiles ACT domain profile. 188 262 IPR002912 -
Lapu7g01964 571 SUPERFAMILY ACT-like 187 255 IPR045865 -
Lapu7g01964 571 SMART serkin_6 289 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01964 571 PRINTS Tyrosine kinase catalytic domain signature 508 530 IPR001245 GO:0004672|GO:0006468
Lapu7g01964 571 PRINTS Tyrosine kinase catalytic domain signature 363 376 IPR001245 GO:0004672|GO:0006468
Lapu7g01964 571 PRINTS Tyrosine kinase catalytic domain signature 446 456 IPR001245 GO:0004672|GO:0006468
Lapu7g01964 571 PRINTS Tyrosine kinase catalytic domain signature 400 418 IPR001245 GO:0004672|GO:0006468
Lapu7g01964 571 PRINTS Tyrosine kinase catalytic domain signature 465 487 IPR001245 GO:0004672|GO:0006468
Lapu7g01964 571 SUPERFAMILY Protein kinase-like (PK-like) 281 547 IPR011009 -
Lapu7g01964 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Lapu7g01964 571 ProSiteProfiles Protein kinase domain profile. 289 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01964 571 Gene3D Phosphorylase Kinase; domain 1 278 366 - -
Lapu7g01964 571 Coils Coil 530 550 - -
Lapu7g01964 571 FunFam Serine/threonine-protein kinase isoform 1 279 367 - -
Lapu7g01964 571 CDD STKc_MAP3K-like 295 537 - -
Lapu7g01964 571 Pfam Protein tyrosine and serine/threonine kinase 289 536 IPR001245 GO:0004672|GO:0006468
Lapu7g01964 571 Gene3D Transferase(Phosphotransferase) domain 1 367 567 - -
Lapu7g01964 571 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 202 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01964 Lapu-Chr7 35832586 35847685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01964 24 547 MAP Kinase Kinase Kinase AT4G35780 48.983 3.95e-176 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lapu7g01964 PK_Tyr_Ser-Thr 4.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01964 - - gmx:100782737 1031.94