Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01959 ATGGGGAGGAAGAAGCCGAGCGCGAGGGATGAGGAGAATGCGTCACAGCAAGGCGGTGGCGGGAAATCGAAGAAGAAGGCGGTGGTCATCGACGACGATGAGTATGCCATTGGAACGGAACTCTCTGAGGAGCCGGCGCTGGAAGAGAAACCCGCTGCGGTGGGAAAGAAGAAAGGTAAGAAAGGCAATGCTAAAGGGAAGACTAATGATGATGATGGTGATGTTGACGATGACGAGGATGTGCCTGAAGTTGTGTTTGCTGGGAAGAAGAAGGGGAAGAACAAGAAAGGAGGTGGGAACAGTGCGTTTACTGCATCTGGCTTTGGTTTACTTGGTGATGAGGAAGGTGATGATGAAGATAAATCTGAAGAGGATGAACCTGTGGTTAATTCTCCGGATAAGAAGCCATCGAAGAAGGGAGGTGGTAGTTTGTTCAATTCATCTGCTTTTGATGCCATCGATGATGATGCTGGTGGTGAGGAGGAGGATGAGCCGGTGGTTAGTTTTACTGGAAAGAAAAAGTCCTCAAAAGGATCGAAGGGATCGAAGAAAGGCGGTGGTAGTTTGTTTGCTGCCTCGGCTTTTGATGCTATTGATGATGGTGAGGATGGTGAGGTGGTGGATGATAAGAATATCGATGTTGATGACGATGAACCTGTTATTGCTTTCACGGGGAAGAAGAAGTCTTCGAAAGGGAGTAAGAAGGGTGGTTCAGTGTTTTCAGCCGCTGTTCTCGGTGAAATTGATGACGGAGAGGAGAAGGAGGATGGTGGTGATGATGGCGACGATATTGGACCAATTACATTTACTGGCAAGAAAAAAAAGTCTTCCAAGAAGGCTGCAGGTTCCGGTAGCAAAGGTGTTTCTGTTGAGGATGATGTTTCTGTACCCGAGTCTGGTAAGGATGGTGACGGAGATGAGGATGATGTTTCTTTAGTTTCGATTTCAGGTAAAAAGAAGTCCTCTAAAAAGAAGGGCAGTAGTACTGCTGCCAAAGGGAGTGATGAAAATGTGGATGTAGTTGAGGCTGAGGCACTCAGTATCGGTGGTGCTGATGCTAGCAACAACAATGTAAATAAGAGTGAAGTTGTTGCTGAAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGTGGAAGAACTGCTGAAGAGGAGGAAGATTTGGATAAGCTTCTTGCAGAGCTTGGTGAGGCTCCTGCACCAAAACCAACCGCTTCTGCACCACAGGATGATAAAGTTCAGCCTGCTCCTGAAGTTGGTCCTCTTACTGCTGATGCTTCTGGGGAAAAGGAGGGTGAAGAGGAGGTGGTAGAGTCAGCTGCTGCAAAGAAGAAGAAGAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCTGCTGCTGCTGCAGCAGCAGCTGGAAGTGCACCAGTAAAGGAATCAGCTGAAGTTAAAGCTGAGGCAATTGAACCAAAGAAGAATGACTCAAAGGCTAAGGCAGCTGATAAGAAAGTGCCAAAGCATGTTAGAGAGATGCAAGAGGCACTAGCTCGAAGAAAAGAGGCTGAAGAAAAGAAGAAAAGAGAAGAGGAAGAGAGGTTAAAGAAGGAAGAAGAGGAACGACGCAGGCAAGAGGAACTTGAGAAACAGGCAGAAGAAGCTAAACGTAGAAAGAAGGAAAGAGAAAAGGAGAAACTCCTGAAAAAGAAGCAAGAAGGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCCCGTCGTTTGGAGGCAATGAGGAGGCAGATTCTCAACAGCACTGGGGGTCTGACTCTCCCCTCTGGGGACTCTGGTGCTCCAGCCAAAAAACCCATATACCAGACAAAGAAGGCAAAATCAAATAATAGAAATCAGAATGGCGCTGCTGCTCAGACAGCTGAAATTGTTGAAGCGAAAGAGATTATTACTGATGTAGTTTCGGAAGAACCAGTAAACATTGAAGAAGTGGAGTCGATTCAGGTGGATGACAAAGTTGATCTTTCTGTCACTGCCGAAGATGATGTAGTGGAAGATGATGAAGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTTAATCTGAATACCAAAGGTGCATTTGCTGACGAAGAGGCTGACTCAGAGCCTAAACCTGTTATAAAAAAGGAGATTAAAAATGCCGTACCTACTCAGAACGCTGGGGCCACTAGCACCACTGTTTCTAAGCCTGTGGCTGATGAAACTGAAAATGGAACCAAGAAGCACAATCCTGACTTGAATAGGGAACCAAGAAAGTCTGCTCCACCCCCTAAGCCTAATGATGAAAACCTCCGCTCCCCAATTTGCTGTATCATGGGGCACGTGGATACTGGCAAGACCAAGCTGCTGGATTGTATCCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGAGGTATCACACAACAGATTGGTGCAACATACTTTCCCGCTGAGAACATACGTGAAAGAACGAAGGAACTGAAAGCTGACGCAAAGCTAAAAGTTCCTGGTCTACTGGTTATTGACACCCCTGGGCACGAGTCGTTTACCAACTTGAGGTCTCGGGGTTCAGGCCTATGTGATATTGCAATTTTGGTTGTGGACATTATGCACGGGTTAGAGCAACAAACAATAGAATCACTGAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTAAATAAGGTTGACAGGCTTTATGGATGGAAAACATGTCGCAATTCTCCAATTGTCAAAGCACTGAAGCAGCAGACTAAGGATGTTCAAAATGAGTTCAATATGAGGCTCACGCAGATTATTACTCAATTCAAAGAACAAGGGATGAATACTGAGTTGTATTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGCGAAGGAATTCCCGATTTATTGTTACTTTTGGTTCAATGGACCCAAAAAACAATGGTTGAGAAACTTACATACAGTGAAGAAGTGCAGTGTACTGTTTTAGAGGTTAAGGTTGTTGAAGGCCATGGAACTACTATAGATGTTGTTTTAGTTAATGGCGTTCTTCATGAAGGAGAACAAATAGTTGTCTGCGGAATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTCAAGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAAATCACTGCCCAGGGCCTTGAGCATGCCATTGCTGGCACAGGTTTATATGTGGTGAAGTCTGATGATGATTTGGAAGATGTCAAAGAAGCAGCAATGGAAGATATGCGGTCAGTTATGAGCAGGATTGACAGGACTGGTGAGGGTGTTTGTGTACAGGCATCGACCCTTGGTTCCTTGGAAGCATTACTGGAGTTTTTGAAAACTCCAGAAGTTAGCATCCCTGTTAGTGGTATAAGCATTGGTCCTGTACACAAAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAAAAGCGAGAGTATGCAACCATATTGGCATTTGATGTCAAAGTTACGCCTGAGGCTAGGGAACTGGCAGATGAATTGGGTGTGAAGATATTTATTGCTGATATCATTTATCATCTGTTTGATCAATTTAAAGCTTATATTGACAACATTAAAGAGGAGAAAAAGAAAGAAGCTGCTGATGAGGCAGTCTTCCCGTGCGTTTTTAAAATCTTACCAAATTGCATTTTCAACAAGAAGGACCCAATTGTTTTGGGAGTCGATATCCTTGAAGGCATTGCAAAGATTGGGACTCCAATTTGCATTCCTTCTAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCTGTTGATTATGCAAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATCCCGAAGAGCAACAGAAGATGTATGGGAGACATTTTGAGATCGACGATGAACTTGTAAGCCACATTTCGCGGAGATCTATTGATATTCTCAAAACTAACTATCGGGATGATCTATCTATGGAGGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGA 4077 0.4368 MGRKKPSARDEENASQQGGGGKSKKKAVVIDDDEYAIGTELSEEPALEEKPAAVGKKKGKKGNAKGKTNDDDGDVDDDEDVPEVVFAGKKKGKNKKGGGNSAFTASGFGLLGDEEGDDEDKSEEDEPVVNSPDKKPSKKGGGSLFNSSAFDAIDDDAGGEEEDEPVVSFTGKKKSSKGSKGSKKGGGSLFAASAFDAIDDGEDGEVVDDKNIDVDDDEPVIAFTGKKKSSKGSKKGGSVFSAAVLGEIDDGEEKEDGGDDGDDIGPITFTGKKKKSSKKAAGSGSKGVSVEDDVSVPESGKDGDGDEDDVSLVSISGKKKSSKKKGSSTAAKGSDENVDVVEAEALSIGGADASNNNVNKSEVVAETSKNKKKNKKKSGRTAEEEEDLDKLLAELGEAPAPKPTASAPQDDKVQPAPEVGPLTADASGEKEGEEEVVESAAAKKKKKKKEKEKEKKAAAAAAAAAGSAPVKESAEVKAEAIEPKKNDSKAKAADKKVPKHVREMQEALARRKEAEEKKKREEEERLKKEEEERRRQEELEKQAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGLTLPSGDSGAPAKKPIYQTKKAKSNNRNQNGAAAQTAEIVEAKEIITDVVSEEPVNIEEVESIQVDDKVDLSVTAEDDVVEDDEEDEWDAKSWDDVNLNTKGAFADEEADSEPKPVIKKEIKNAVPTQNAGATSTTVSKPVADETENGTKKHNPDLNREPRKSAPPPKPNDENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKALKQQTKDVQNEFNMRLTQIITQFKEQGMNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKSDDDLEDVKEAAMEDMRSVMSRIDRTGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVFKILPNCIFNKKDPIVLGVDILEGIAKIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNPEEQQKMYGRHFEIDDELVSHISRRSIDILKTNYRDDLSMEEWRLVVKLKNLFKIQ* 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 718 735 - -
Lapu7g01959 1358 NCBIfam small GTP-binding protein domain 771 897 IPR005225 GO:0005525
Lapu7g01959 1358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 766 1057 IPR027417 -
Lapu7g01959 1358 Coils Coil 430 462 - -
Lapu7g01959 1358 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 766 982 IPR000795 GO:0003924|GO:0005525
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 1 187 - -
Lapu7g01959 1358 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1091 1220 IPR036925 -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 427 445 - -
Lapu7g01959 1358 FunFam Eukaryotic translation initiation factor 5B 760 988 - -
Lapu7g01959 1358 CDD IF2_aeIF5B_IV 1229 1324 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 668 683 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 475 582 - -
Lapu7g01959 1358 Gene3D - 1110 1214 IPR036925 -
Lapu7g01959 1358 Coils Coil 497 564 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 611 626 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 713 767 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 350 364 - -
Lapu7g01959 1358 Gene3D Translation factors 989 1109 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 112 126 - -
Lapu7g01959 1358 Gene3D Translation factors 1221 1358 - -
Lapu7g01959 1358 Gene3D - 760 988 IPR027417 -
Lapu7g01959 1358 CDD aeIF5B_II 990 1100 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 667 687 - -
Lapu7g01959 1358 FunFam Eukaryotic translation initiation factor 5B 1221 1358 - -
Lapu7g01959 1358 PRINTS GTP-binding elongation factor signature 834 844 IPR000795 GO:0003924|GO:0005525
Lapu7g01959 1358 PRINTS GTP-binding elongation factor signature 770 783 IPR000795 GO:0003924|GO:0005525
Lapu7g01959 1358 PRINTS GTP-binding elongation factor signature 886 895 IPR000795 GO:0003924|GO:0005525
Lapu7g01959 1358 PRINTS GTP-binding elongation factor signature 850 861 IPR000795 GO:0003924|GO:0005525
Lapu7g01959 1358 FunFam eukaryotic translation initiation factor 5B 989 1108 - -
Lapu7g01959 1358 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 332 1355 IPR015760 -
Lapu7g01959 1358 Pfam Elongation factor Tu domain 2 1005 1080 IPR004161 GO:0005525
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 245 626 - -
Lapu7g01959 1358 CDD IF2_eIF5B 769 979 - -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 736 760 - -
Lapu7g01959 1358 Pfam Translation-initiation factor 2 1094 1207 IPR023115 -
Lapu7g01959 1358 FunFam Eukaryotic translation initiation factor 5B 1108 1214 - -
Lapu7g01959 1358 Pfam Elongation factor Tu GTP binding domain 770 978 IPR000795 GO:0003924|GO:0005525
Lapu7g01959 1358 SUPERFAMILY Translation proteins 1225 1357 IPR009000 -
Lapu7g01959 1358 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01959 Lapu-Chr7 35759026 35768308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01959 1 41 Eukaryotic Initiation Factors Gene Family AT1G76810 65.217 7.14e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01959 K03243 - gmx:100814875 1792.32