Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01955 ATGGAAGGGAATTTGCCACAAGGAGGTATAATTCAAGGTGGGACATCTTTTGGTGGCTTTGATTTGCCGGGATCAATTCGGGTTCAGCATCAAGCACAGCATCCCCATACCATGCACCAACATCAAACTCATCCGCGTCAAGGGTCTTCTGTACATTCCACAGTTCATGATGTTTTCCCTCTTACAATGGGAACCCTGCAGAATTGTGACCAAACCATATCAATGACAGAGTTTAGTAAAGGAGACAGAAGCAAAAACTCCGCGAGTGAGGAAGACGAGCCGAGCTTTACTGAGGATGGTGTTGATTGTCACCATGAAGCCGGTAGAGGGAAGAAAGGATCACCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAAACTTCTGATAACAGCTGTTTCTTATATTGGTGAGGATTTAACTGTTGATGGTGGTGGCAGTGGAAGAAGGAAATTTGCAGTATTACAGAAGAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAGAGGGGTTATCATGTTTCACCTCAGCAATGCGAGGATAAATTCAATGATCTCAATAAAAGATATAAAAAGCTTAATGATATGCTAGGGAGAGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCACTGTTGGACGTAATAGGTTTTCTTTCTGATAAAGAAAAAGACGACGTTCGAAAAATATTAAGCTCTAAACATTTGTTCTATGAGGAGATGTGTTCTTACCATAATGGTAATAGGTTGCATTTACCCCATGATCCTGCATTGCAACGTTCACTGCAGTTGGCACTGCGAAATAGGGATGATCATGATAATGATGATATGAGAAGGTCCCATCACGATGATCATGACGAAGACGACCCAGATGTGGAAATTGATGATCATGATGACTTTGAAGAGAATTGTGCTTCTCATGGTGATAGTAGAGGAATATATGCACCATTAGGTGGACCTCTGAAGAAATTGAAACAAGGCCAAGAAGAGGGTAATACTTTTGGTAATTCTTTAAATTGTCAGGACTACAACAAAAGTTCATATCCCCATGGGCAGATGGTCCAATCTGATGTGAATCAAGGTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCACTTCAGTTAGAGGAACAAAAGCTACAAATTCAGGTTGAGATGCTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAAAAAAAGGATCGGGAGTTGGAGAAGCTAAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGCATTGCTTTAGAACTGAAGCGAAAGGAAATGAGCACTGGCTTTAAATAG 1341 0.4146 MEGNLPQGGIIQGGTSFGGFDLPGSIRVQHQAQHPHTMHQHQTHPRQGSSVHSTVHDVFPLTMGTLQNCDQTISMTEFSKGDRSKNSASEEDEPSFTEDGVDCHHEAGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDLTVDGGGSGRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIGFLSDKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDMRRSHHDDHDEDDPDVEIDDHDDFEENCASHGDSRGIYAPLGGPLKKLKQGQEEGNTFGNSLNCQDYNKSSYPHGQMVQSDVNQGLPESMRAAWLQKQWVESRSLQLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMSTGFK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01955 446 MobiDBLite consensus disorder prediction 1 53 - -
Lapu7g01955 446 MobiDBLite consensus disorder prediction 30 53 - -
Lapu7g01955 446 MobiDBLite consensus disorder prediction 83 115 - -
Lapu7g01955 446 Coils Coil 408 440 - -
Lapu7g01955 446 Gene3D - 121 193 - -
Lapu7g01955 446 Coils Coil 378 400 - -
Lapu7g01955 446 MobiDBLite consensus disorder prediction 269 287 - -
Lapu7g01955 446 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Lapu7g01955 446 PANTHER F16F4.11 PROTEIN-RELATED 1 443 - -
Lapu7g01955 446 MobiDBLite consensus disorder prediction 269 312 - -
Lapu7g01955 446 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01955 Lapu-Chr7 35717143 35725097 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu7g01955 Myb_DNA-bind_4 3.3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01955 - - gmx:100812134 775.393