Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01951 ATGCGATCATCTGAAGGGGGAGAGTGGATGAGTGTAGGAACTGTATCCATGGCACACCGCAGAGAGATGCCTTTCCCAGCACCAAATGTCGTGTCTGTCAGACTGGAGCCTAAAAAGAAAACGGTTTTGAGGCAATTTCTCACCAATCATTTCAGAGTCAATTTTGGAAACACTGATGATTACTTCTATGAGTATAGTGTATCTTTTTCTTATGAAGATGGACATCCTGTACAGGGTAAGGGCGTAGGGAGAAAGGTGCTCGACAAGTTGCAGAAGACATGTAATTCTGAATTGAACGGGAAGGATTTTGCTTATGATGGGGACAAAACTCTTTTTACACTTGGTTCTCTTGCCAGCAAGAATCTTGAGTTTACTGTTGTTTCTACTAGCAGCCATGATAAAAATCCAGAATCAAGTGAGAGTGACAAGAAGAGGATGAGGCACCCAAATAGAGCTAAAACTTTGAAAGTTCAGCTATCTTTTGCTTCAAAGATTTCATTGCAGGCCATCGTCAATGCTCACAGTGGACAGGGTTGTGATAAAGAAGCAATAAGAGTTCTTGATATAATTCTGAGGCAGCATGCGGCTAAAGAAGGCCGTTTGCTTGTGCGCGAGTCATTCTTCCGTAATGATCCGAAGAATTTTGATGATATAGGAGAAGGTGTGCAAATCTGCAGGGGATTTCATTCTAGTTTTAGAACCACGCTGAGTGGCTTGTCACTTAACATAGATGTCTCATCCACAACGATAGTTACTCCTGGGCCTGTGTTAGACTTCCTGAAATCCAATCAGTGTCCAAAAGATCCATCTTCTATCGACTGGGTAAAGGCTAAGAGGACACTGAAAAACTTGAGGATTAAAACAAGTACATCCAATCAAGTATATAAGATTACTGGGCTCAGTGATCACACATGCAAAGAACAAATGTTTACTTTGAAGAAAAAGGGTGGAGTGGATGGTGATGATGAAACTCAGGAGGTGAGTGTGTATGATTATTTTGTTAAGCATCGAAACATACCTCTCAGTTACTCAGAGGATCTCCCATGCATTAGTGTTGGAAAGCCTACACGGCCAACATATTTTCCTCTTGAGCTTTGCTCTTTGGTGTCCCTTCAACGTTATACAAAAGCTCTAACCACAAACCAAAGGTCCTCATTGTTGGAGAAATCTAGACAAACGCCGCAAGAGAAGATGGGAGTCCTGATGACAGATGCTTTGAGTGACTGCAAGTATGATTCTGAACCTATGCTTCGCAACTGTGGTATTTCTATCAACCCTAGCTTTACTGAAGTAGAAGGTCGAATTTTACAAGCTCCAAGGTTGGAGTTTGGAGAAGGGAAGCGGCTCAATCCGACAAATGGCAGGTGGAACTTCAACGGGAAGAAATTAATTAAGCCATCAAAAATTGGAAAATGGTACGTGGTAGACTTTTCTGGGCGAAGTGATCTAGACATCCTTGTGAAGGATTTCGTCAAGTGTGGTCAAAATAAAGGAATTACGATCAACGACCCTGATGATACTTTCCGAGAATGTTTTGCAAATAAATCTTCACCTCAGGAAACAGTGGAGAAAATGTTTAACATCATATTTTCTAAACTTTCTGAGGCTCCACAATTTCTTCTGTGTCTGCTCCCTGTTAGAAATTCTGATCTTTATGGTCCGTGGAAGAGAATGGTTCTTATTCAGAAGGGAGTTGTTACCCAGTGTATAGCTCCACCATCAAAGGTCAATGATCAGTATTTAACTAATGTTTGGTTGAAGATCAATGCTAAGCTTGGTGGCCTGAATTCAATGTTACGCGATGAAGTTCGTGGTTCCATTCCTGTTGTTTCCAGAGTTCCCACCATCATTATTGGCATGGATGTGTCTCATGGCTCCCCTTCAATTGCAGCGGTAATTGAGTAG 1905 0.4168 MRSSEGGEWMSVGTVSMAHRREMPFPAPNVVSVRLEPKKKTVLRQFLTNHFRVNFGNTDDYFYEYSVSFSYEDGHPVQGKGVGRKVLDKLQKTCNSELNGKDFAYDGDKTLFTLGSLASKNLEFTVVSTSSHDKNPESSESDKKRMRHPNRAKTLKVQLSFASKISLQAIVNAHSGQGCDKEAIRVLDIILRQHAAKEGRLLVRESFFRNDPKNFDDIGEGVQICRGFHSSFRTTLSGLSLNIDVSSTTIVTPGPVLDFLKSNQCPKDPSSIDWVKAKRTLKNLRIKTSTSNQVYKITGLSDHTCKEQMFTLKKKGGVDGDDETQEVSVYDYFVKHRNIPLSYSEDLPCISVGKPTRPTYFPLELCSLVSLQRYTKALTTNQRSSLLEKSRQTPQEKMGVLMTDALSDCKYDSEPMLRNCGISINPSFTEVEGRILQAPRLEFGEGKRLNPTNGRWNFNGKKLIKPSKIGKWYVVDFSGRSDLDILVKDFVKCGQNKGITINDPDDTFRECFANKSSPQETVEKMFNIIFSKLSEAPQFLLCLLPVRNSDLYGPWKRMVLIQKGVVTQCIAPPSKVNDQYLTNVWLKINAKLGGLNSMLRDEVRGSIPVVSRVPTIIIGMDVSHGSPSIAAVIE* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01951 634 FunFam Protein argonaute 7 248 374 - -
Lapu7g01951 634 Pfam Argonaute linker 1 domain 203 251 IPR014811 -
Lapu7g01951 634 ProSiteProfiles PAZ domain profile. 254 370 IPR003100 GO:0005515
Lapu7g01951 634 SUPERFAMILY Ribonuclease H-like 431 626 IPR012337 -
Lapu7g01951 634 Gene3D paz domain 247 374 - -
Lapu7g01951 634 SMART DUF1785_2 201 253 IPR014811 -
Lapu7g01951 634 Pfam N-terminal domain of argonaute 47 191 IPR032474 -
Lapu7g01951 634 ProSiteProfiles Piwi domain profile. 539 624 IPR003165 GO:0003676
Lapu7g01951 634 SUPERFAMILY PAZ domain 248 403 IPR036085 GO:0005515
Lapu7g01951 634 Pfam Argonaute linker 2 domain 401 442 IPR032472 -
Lapu7g01951 634 Pfam PAZ domain 257 387 IPR003100 GO:0005515
Lapu7g01951 634 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 45 633 - -
Lapu7g01951 634 Gene3D - 435 600 - -
Lapu7g01951 634 MobiDBLite consensus disorder prediction 128 149 - -
Lapu7g01951 634 Pfam Piwi domain 540 627 IPR003165 GO:0003676
Lapu7g01951 634 CDD PAZ_argonaute_like 253 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01951 Lapu-Chr7 35612009 35617157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01951 48 633 Eukaryotic Initiation Factors Gene Family AT5G43810 31.536 4.28e-79 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01951 K11593 - gmx:100779439 783.097