Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01950 ATGATTGACAATTTGTTTAAGAAAGTCTCTGAAGTGAACTCCGACGGCACGCGTCGAGAGCGGGACGGTGGCATGATTCAAGAAGTGCTGAAGAATTTCTATACAAGTTCTAGGTGCAAAAAGCCTCAATATGTTATCATCTTCAGGAACGGGGTTAATGAATCACAGTTCAATCAAGTTTTAAATATTGAACTTAGTCAAATTATTGAGGCTTGCAAGTATAAAGATCCTGAGTGGAATCCCAAATTTTTGGTTATTGCTGCTCAAAAGAACCATCATACTAGATTCTTTCAACCCGGATCTCCAGATAATGTTCCTCCTGGAACTGTAGTTGATAACGTAATTTGTCATCCTCGTAACTATGATTTTTACATGTGTGCACATGCTGTAAAAGTGGGTACTGGTAGACCTACACACTATCATGTTCTGTTAGATGAGATTGGGTTGTCAGGCAATAATGTGCAGGAGCTTGTGCACTCCTTATCATACATGTATCAGAGGAGCAGCTCGGCCGTTTCTGTCGTTGCTCCACTCTATTATGCTCACTTGGCTGCAACTCAGATGGGAGAGATTATGAAATTTGAGAAAAGATTGGGCGCGGCTGCTGACCCTGTCCCTCAATTGCCTGAATTGAAAGAAAATATCTCTGAATCAATGTTCTTTTGCTGA 669 0.4096 MIDNLFKKVSEVNSDGTRRERDGGMIQEVLKNFYTSSRCKKPQYVIIFRNGVNESQFNQVLNIELSQIIEACKYKDPEWNPKFLVIAAQKNHHTRFFQPGSPDNVPPGTVVDNVICHPRNYDFYMCAHAVKVGTGRPTHYHVLLDEIGLSGNNVQELVHSLSYMYQRSSSAVSVVAPLYYAHLAATQMGEIMKFEKRLGAAADPVPQLPELKENISESMFFC* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01950 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 14 195 - -
Lapu7g01950 222 Gene3D - 1 222 IPR036397 GO:0003676
Lapu7g01950 222 Pfam Piwi domain 25 192 IPR003165 GO:0003676
Lapu7g01950 222 ProSiteProfiles Piwi domain profile. 40 193 IPR003165 GO:0003676
Lapu7g01950 222 SMART Piwi_a_2 1 193 IPR003165 GO:0003676
Lapu7g01950 222 SUPERFAMILY Ribonuclease H-like 23 191 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01950 Lapu-Chr7 35610011 35611848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01950 1 222 Eukaryotic Initiation Factors Gene Family AT5G43810 40.741 6.58e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01950 K11593 - gmx:100792105 327.791