Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01937 ATGATGTCACGTTTTATGCATGCGCCTTCTCCAGGTTTGTCTTCTTCTCCTGGGCCTGCTCTTTTGAGGTCGGGCTCGGGCTCGGGCTGGGTTGGGCAGAAAAGAGCACGTGAAGATGAGAGTGGTACTGCCGCGAGTGGGAGTGCGGGTGAGGGTGGTTCGTCACAGAGTGCGTCACAAGAAGAAAGCGGCGAGAGGAGGAGGAGATACAGAGGGGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATTCGCGATCCTCACAAAGCGGCAAGAGTGTGGCTCGGCACCTTCGACACAGCCGAGGCTGCAGCCAGAGCTTACGATGAAGCCGCATTGAGGTTCAGAGGTAACAGAGCCAAACTCAACTTTCCCGAAAACGTTACCGCGGTTCGACCTCCTCACCTTCCCGAATTTCCGGCCACCGCACTCGCCGGTTCTGGTGACGTTCCCGCGGTGTCAGGTTATTCTCCGACGGTGATGCAGGGGGCGCCGTTTCAGAGCTCCTCCGATTTGCTTAGAGACTATTGGGGGTATTCACAGCTGCTGCGGAGCACAGGGGAGTTCCATGGACTGGACCAGTTGTTCTATGATTCGCAAATGGCAGCGCTTCAATCTTCTTCATCGTCGTTGATGCCGTTACCGCCTGCGTATGCACCATCCTCTGCTTCCTTTCCTCTGTTTTCGAGCCAGCAAATGGGACTTTTCCGGCCGCCGGGACAGCAGCCTCACGGCGGAGGAGAGGGTGGTAGCGGGTCAGAGTTTCCACCTTCGACGTGGTCAGATACCAGTGGCTATCCTCCTCCACCTCCACCACCAGGTTGA 828 0.5785 MMSRFMHAPSPGLSSSPGPALLRSGSGSGWVGQKRAREDESGTAASGSAGEGGSSQSASQEESGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVTAVRPPHLPEFPATALAGSGDVPAVSGYSPTVMQGAPFQSSSDLLRDYWGYSQLLRSTGEFHGLDQLFYDSQMAALQSSSSSLMPLPPAYAPSSASFPLFSSQQMGLFRPPGQQPHGGGEGGSGSEFPPSTWSDTSGYPPPPPPPG* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01937 275 CDD AP2 77 128 IPR001471 GO:0003700|GO:0006355
Lapu7g01937 275 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Lapu7g01937 275 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Lapu7g01937 275 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Lapu7g01937 275 Pfam AP2 domain 69 118 IPR001471 GO:0003700|GO:0006355
Lapu7g01937 275 PANTHER DNA-BINDING DOMAIN 50 165 IPR044808 GO:0003700|GO:0009873
Lapu7g01937 275 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Lapu7g01937 275 MobiDBLite consensus disorder prediction 233 275 - -
Lapu7g01937 275 FunFam Ethylene-responsive transcription factor 2 68 127 - -
Lapu7g01937 275 Gene3D AP2/ERF domain 68 128 IPR036955 GO:0003700|GO:0006355
Lapu7g01937 275 MobiDBLite consensus disorder prediction 1 73 - -
Lapu7g01937 275 SUPERFAMILY DNA-binding domain 69 127 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01937 Lapu-Chr7 35377467 35380020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01937 48 144 AP2-EREBP Transcription Factor Family AT2G33710 65.979 2.54e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01937 AP2 4.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01937 - - gmx:100802242 269.24