Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01931 ATGGGCTGTGTTCAGGCCAAGCCATTGGATTTGGAAGGTCCAGACTACAGGAGCCTAGAGAGGTTGAAATTGGATAATGGGTATGTCGCAAGTTCTGACTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATGACCCCATTAAGGACCATCACAGGCTGCATCAGCATCAGAGAGAACAACCCGTAAAGAATAAAGTTGAGTCTGGTGTTGCCAATGATGGTGCAGGGCATCATAAGGGCAAGATGGTTGGAAGAGAAGGGAGGAGAGTCACGCGTCGTGATGATAAGAAATTGGCAAACAAGTCTTGCTTCGAGGATGAGATGGTAGATGGGTGGCCAAGGTGGATGGTTGATAATGTTCCTGCAGAAGTGTTGGCTGGCTTGGTTCCCAGGAGTGCTGAATCCTACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATCGAGACACAGGAGAAATTGTGGCCCTGAAGAAGGTTCGCTTCAATACATCCGAGCCTGAAAGCATAAAGTTTATGGCAAGAGAAATTATGATATTACAGAGACTGGATCATCCCAATGTAGTCAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATCTATCTAGTTTTTGACTTCATGCAAACAGATTTGGCACGAGTTATTGCTCGTCCTGAAGAGAGACTATCAGAACCACAGGTCAAGTGCTATATGCATCAATTACTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTCTTCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGCATGCTTAAGATTGCAGATTTTGGACTTGCCAATTTTTATGGTCCAGATCATCATCAGCCTCTCACTAGCCGGGTTGTTACGCTATGGTACAGAGCTCCTGAATTGTTGTTAGGTGACACAGACTATGGAGTTGGTATTGATCTGTGGAGTGCTGGATGTCTCTTGGCAGAAATGTTTAAAGGATTCCCAATCATGCCTGGCAGAACTGAGGTTGAGCAAATTCATAAAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTGAAACTTTCTACAACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTCTAGAAACTTTCGGAGATCTCCCTCCATCTTCTTTAGGTCTTTTATGCACTTTGCTTGCTTTGGATCCTGCATTCCGTGGCAGTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCATGTGACCTCTCTGGTCTGCCTGCAATCTTCAGAGAGGATGATGACCAGGTTCAAGCCAACGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATATCTGGAGCGTCGTAAGAGTTCATCATCTAGGAGGTCAATAGAGCATACCGTATCTTCTAAAGAGGAATTGATAAGGAATGCTAAACTTGAAACTTATGCTCCAACTGAAGATGTGGATAGCACAAGTAGTACCTCATCTAGTGTAAACCCAGGAGGGGCTAAGGACCAATCACCTTTTTTTCTATCTCCCTTTGGGGAACTAGATCGAAAGCTATCTCCAAAAACCCACCACCATATTAATGTTGGTAAAGAAAAGATCAAGAACCTTCCTCCATTACCCAAGTCAAAACCAAATGCTACCAAGAAAGATGACAGTAGATACAGACCAGAGCAGTTTTTCAGGTCAGCTTCCACCAGAGAATTTAGATACTTAAAAAGGGAGGAACGTTTACTATTGGATTTTGATGATTAG 1794 0.4264 MGCVQAKPLDLEGPDYRSLERLKLDNGYVASSDFVAHRRSTGQRHDPIKDHHRLHQHQREQPVKNKVESGVANDGAGHHKGKMVGREGRRVTRRDDKKLANKSCFEDEMVDGWPRWMVDNVPAEVLAGLVPRSAESYKMIDKVGQGTYSNVYKALDRDTGEIVALKKVRFNTSEPESIKFMAREIMILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMQTDLARVIARPEERLSEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANFYGPDHHQPLTSRVVTLWYRAPELLLGDTDYGVGIDLWSAGCLLAEMFKGFPIMPGRTEVEQIHKIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLLETFGDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPAIFREDDDQVQANEQIKYMNSKIRRSRTYLERRKSSSSRRSIEHTVSSKEELIRNAKLETYAPTEDVDSTSSTSSSVNPGGAKDQSPFFLSPFGELDRKLSPKTHHHINVGKEKIKNLPPLPKSKPNATKKDDSRYRPEQFFRSASTREFRYLKREERLLLDFDD* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01931 597 Gene3D Transferase(Phosphotransferase) domain 1 220 473 - -
Lapu7g01931 597 MobiDBLite consensus disorder prediction 558 572 - -
Lapu7g01931 597 SMART serkin_6 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01931 597 MobiDBLite consensus disorder prediction 460 488 - -
Lapu7g01931 597 Gene3D Phosphorylase Kinase; domain 1 127 219 - -
Lapu7g01931 597 MobiDBLite consensus disorder prediction 38 64 - -
Lapu7g01931 597 FunFam Putative serine/threonine-protein kinase 220 457 - -
Lapu7g01931 597 MobiDBLite consensus disorder prediction 496 514 - -
Lapu7g01931 597 Pfam Protein kinase domain 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01931 597 MobiDBLite consensus disorder prediction 539 572 - -
Lapu7g01931 597 SUPERFAMILY Protein kinase-like (PK-like) 132 423 IPR011009 -
Lapu7g01931 597 ProSiteProfiles Protein kinase domain profile. 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01931 597 MobiDBLite consensus disorder prediction 460 517 - -
Lapu7g01931 597 MobiDBLite consensus disorder prediction 38 95 - -
Lapu7g01931 597 MobiDBLite consensus disorder prediction 73 95 - -
Lapu7g01931 597 PANTHER CELL DIVISION PROTEIN KINASE 135 424 - -
Lapu7g01931 597 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Lapu7g01931 597 FunFam probable serine/threonine-protein kinase At1g54610 124 219 - -
Lapu7g01931 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01931 Lapu-Chr7 35308075 35312166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01931 132 454 Core Cell Cycle Gene Families AT5G10270 45.161 2.40e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lapu7g01931 Pkinase 7.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01931 K08819 - gmx:100776854 1021.92