Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01923 ATGACCTCGAAAGTTCCCTCCCCAGATTCAATTGATGCATTGAAGTCTAAAATGTCTGTTCAGAAGGACCCTGATAAGTTCGTCATGTCTATCACTGAAGGAGAGAAAAAGCCATTTGACTTTTTACGTCTTCTATATGATGGTTGCATTGCTGGAGGTGTTGCGGGTGTCATGGTAGAAACAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTTGCTCGTGATGGAGGAAAGATTGTTCTGAAGGGTCTGTACTCTGGATTGTCTGGAAATCTTGTTGGCGTCTTGCCAGCTTCTGCAATTTTTATTGGAGTGTATGAACCCACAAAGCAGCAATTGCTAAAGTCATTGCCTGAGAATCTCAGTGCTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTCTTGTTCGGGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAGATTGGTCAATTTAGATCAGCTCCGGATGCTGTTCGTCTCATTGTCTCAAATGAGGGTTTTAAAGGTCTTTATGCGGGATATGGATCTTTCTTATTGCGAGATTTACCATTTGATGCCATAGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATAACTGGAGCAGTTACAACTCCTCTTGATGTTGTAAAGACCAGATTGATGGTTCAGGGATCACAAAACCATTACAAAGGCATCAGTGATTGTGTGAGGACAATAGTTAAAGAAGAAGGAACTCATGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTATGGATAGGAGTTGGAGGTTCAATATTTTTTTGTGTTCTTGAGAAAACAAAACAAATTCTTGCTCAGAATCGGCATCCCAAAGCTTAG 933 0.4191 MTSKVPSPDSIDALKSKMSVQKDPDKFVMSITEGEKKPFDFLRLLYDGCIAGGVAGVMVETALYPIDTIKTRLQVARDGGKIVLKGLYSGLSGNLVGVLPASAIFIGVYEPTKQQLLKSLPENLSAVAHFAAGAIGGIASSLVRVPTEVVKQRMQIGQFRSAPDAVRLIVSNEGFKGLYAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAITGAVTTPLDVVKTRLMVQGSQNHYKGISDCVRTIVKEEGTHALFKGIGPRVLWIGVGGSIFFCVLEKTKQILAQNRHPKA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01923 310 Gene3D Mitochondrial carrier domain 48 309 IPR023395 -
Lapu7g01923 310 SUPERFAMILY Mitochondrial carrier 49 296 IPR023395 -
Lapu7g01923 310 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Lapu7g01923 310 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Lapu7g01923 310 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Lapu7g01923 310 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 47 310 - -
Lapu7g01923 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Lapu7g01923 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
Lapu7g01923 310 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 19 307 - -
Lapu7g01923 310 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Lapu7g01923 310 Pfam Mitochondrial carrier protein 219 305 IPR018108 -
Lapu7g01923 310 Pfam Mitochondrial carrier protein 49 80 IPR018108 -
Lapu7g01923 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 115 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01923 Lapu-Chr7 35218904 35226132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01923 132 304 Chloroplast and Mitochondria Gene Families AT2G30160 29.834 8.19e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01923 K15111 - gmx:100800051 526.939