Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01903 ATGGGTGAGGCTTCGGGAGATGATTCAGCTGATTGCTTCAGCCAGATGATGTCATCGATGCCGGGTTTTCGCTTCCATCCCACGGATGAGGAGTTGGTGATGTACTATCTGAAGCGGAAGATTTGTGGGAAGAGGTTGAAGCTGAATGTTATTCGTGAAACCGATGTGTATAAGTGGGATCCTGAGGAGTTGCCTGGGCAATCCATACTGAAAACTGGAGATAGGCAGTGGTTCTTTTTCTGTCACAGAGATAGGAAGTATCCTAATGGTGCAAGGTCTAATCGAGCCACCAGACATGGATACTGGAAGGCAACAGGAAGGGATCGTAATGTGATTTGCAATTCTAGGGCAGTTGGAGTGAAAAAAACCCTGGTTTTCTATATAGGCAGAGCTCCCAGTGGCACGCGGACTGATTGGGTTATGCATGAATACACCATGGATGAAGAGGAGCTTAAGAGATGCCAGGGTGTTAAGGACTATTATGCGCTTTACAAGGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTGATGAACAAGAGTGGGCAGCAGATGATGATGACGTAGTAGATTTTAATATTTACACAACTGATCAGGAGGCTCCAAATGTTGTCACTGACGATATGAATGTACCACATCCTTTGCTTGATGATGAAATCAACGACTTCATTAGAAAAATTTTGGACGATGAGCTTGTCCTTGATCAGCAGCTTGTGAATGGTTATCCTGACCTTCCTCAGGTTGTTACTGAAGAAACACAAAGTACTGTTGTGGATCAGTTCTCTGAGGCGGTGATGTTCCCTGAGGCAACCAATCCTAGCTGTCAATTTTTTGATGTGCAGCCCAGCTTTGATTTCAACCAGCCAGTTACTTCTCATTTACAAGTTTCTGATGCATCCGAAGTTTCTTCTGCCTCCAACATTAAAACGAAGGGGCTTGACTTGGATGAGGATGGCTTTTTGGAAATTAATGATCTCATTGAAACTGAACCTACTTTGGCAAATGTGGAAAATCCCGTGGAGTGCCTGCAGTTTGAAGATGGGTTAAGTGAGCTTGATCTGTACCAAGATGCAGAGATGTTTCTTCGTGACTTGGGGCCAATTATTCACGAAACTGATTCACATGCATATACGAATGCCCTTGTCAGCAGCAATATTGAAAGTCAGAGTTACCAGTTAATATCCAACGCAGAGGATGCCAACCAAACTGTTGGTGAATTGTGGATGCATGGTGAAAGAAACACCCTGATTCCATCAGAAGAAGGCTTTGTTGATTCTTTCTCTCTATCATCCCCAGGTGTTGTATGTGAATCTCTCAGCTTTCCTACGGAAGGCAATTACAAACAAAGTAGCACCGTGGAAGATGTTGCTACAAGTAGCTTGTCCTCTTCTCTCTGGGCCTTTGTTGAGTCAATACCTACTACTCCTGCATCAGCTGCTGAAAGTGCTTTGGTGAACCGAGCTTTGAATCGAATGTCTAGCTTCAGCCGGGTAAAGATCAGGCACACAAACATTGCTGCAGGTAAAGACACTGCAACTATGAAGAAAGCAGGCAGAAAGGGATTTTCATTCCTTTTCTTCCCTATTCTTATTGCTTTATGTGCTTTTTTGTGGGTTTTTGTTGGAAACTTAAGATTATTAGGGAGATGTATCTCTCCTTGA 1683 0.4349 MGEASGDDSADCFSQMMSSMPGFRFHPTDEELVMYYLKRKICGKRLKLNVIRETDVYKWDPEELPGQSILKTGDRQWFFFCHRDRKYPNGARSNRATRHGYWKATGRDRNVICNSRAVGVKKTLVFYIGRAPSGTRTDWVMHEYTMDEEELKRCQGVKDYYALYKVFKKSGPGPKNGEQYGAPFDEQEWAADDDDVVDFNIYTTDQEAPNVVTDDMNVPHPLLDDEINDFIRKILDDELVLDQQLVNGYPDLPQVVTEETQSTVVDQFSEAVMFPEATNPSCQFFDVQPSFDFNQPVTSHLQVSDASEVSSASNIKTKGLDLDEDGFLEINDLIETEPTLANVENPVECLQFEDGLSELDLYQDAEMFLRDLGPIIHETDSHAYTNALVSSNIESQSYQLISNAEDANQTVGELWMHGERNTLIPSEEGFVDSFSLSSPGVVCESLSFPTEGNYKQSSTVEDVATSSLSSSLWAFVESIPTTPASAAESALVNRALNRMSSFSRVKIRHTNIAAGKDTATMKKAGRKGFSFLFFPILIALCAFLWVFVGNLRLLGRCISP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01903 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 269 - -
Lapu7g01903 560 SUPERFAMILY NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
Lapu7g01903 560 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Lapu7g01903 560 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Lapu7g01903 560 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Lapu7g01903 560 FunFam Nac domain-containing protein 86 28 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01903 Lapu-Chr7 35046498 35051907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01903 6 558 NAC Transcription Factor Family AT1G34190 43.803 2.27e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu7g01903 NAM 5.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01903 - - gmx:100794925 952.199