Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01895 ATGAGCACTTCCACCAAGGCAATGGAGAATGTTCCAGCATTGATTTACAAAAACCCCATTAGGAGAACCTCTAGGCGATCTACAATGTATCTTGGCGTGAGAAAAAGGCCATGGGGAAGATATGCTGCTGAGATTAGGAACCCTTATACCAAAGAGAGACACTGGCTAGGCACATTTGACACTGCTGAAGAGGCTGCTGTAGCTTATGATCTTTCATCTATCAAGATTTGCGGTATTAATGCTCGAACTAACTTTCATTACCCTTTTGTGTCTCTTCCACCACCTCCTATGTCATTGCCTCCTCCACCGCCACCACCTACCCCGGAGTTGGATCATCAAAGTGTTGGAGTTTGTGCAGAGATGAATGCTGCTTTCGATGGCGATGATGAATCTCTGGTCATTGCTTCCATTTTGCAAAGCTTTTCTAACTCTGGTAACTGTTCTTTTTAG 450 0.4444 MSTSTKAMENVPALIYKNPIRRTSRRSTMYLGVRKRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAVAYDLSSIKICGINARTNFHYPFVSLPPPPMSLPPPPPPPTPELDHQSVGVCAEMNAAFDGDDESLVIASILQSFSNSGNCSF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01895 149 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Lapu7g01895 149 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Lapu7g01895 149 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Lapu7g01895 149 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Lapu7g01895 149 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Lapu7g01895 149 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Lapu7g01895 149 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Lapu7g01895 149 CDD AP2 30 85 IPR001471 GO:0003700|GO:0006355
Lapu7g01895 149 Pfam AP2 domain 31 76 IPR001471 GO:0003700|GO:0006355
Lapu7g01895 149 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01895 Lapu-Chr7 34995217 34995900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01895 30 101 AP2-EREBP Transcription Factor Family AT1G12890 68.919 2.35e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01895 AP2 7.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01895 - - var:108324731 247.669