Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01878 ATGCCAACACCATCCCCGAATGGAGACTCCTCTAACTCCAATCCCCCTCCCAAACACACCCCTCAAGAATCTCGTGATCTCCCTCCTTTTTTGTCTTCTTCTTACCCCATCACTCTTAAGTTCATGGACGTCGCCTACCGCTTGAAGATAGAGGACAAACAAAAGAGCGGCGGGAGCATCAAGAGCTTCTTTACAACGCACCCATCATCACCATCTGATCAAGCTTCAACTGCTGCCCCGCCGCAGGAGCGAGTTATTTTACAAGGCGTGACGGGGATAGCACACCCAGGGGAAATCTTAGCAGTGCTGGGCCCATCGGGGAGCGGAAAATCCACGCTCTTAAACGCGCTCGCAGGGAGGCTCCATGGGAACGGCCTCACCGGAACAATCCTCGCCAACTCCAGCAAACTCAACAAATCTGTTCTCCGGAGAACCGGATTCGTTACTCAGGACGACATCCTCTACCCGCATCTCACGGTTCGCGAGACGCTGGTGTTCTGCGCCATGCTGCGCCTCCCGCGCACGCTGCCGCGCGCGGCGAAAGTCGCGGCGGCAGAGTCGGCCATGGCGGAGCTAGGGCTGAGGAAGTGCGAGCATACGATAATCGGAAACAGCTTCATCCGCGGCGTCTCCGGCGGGGAGCGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCCTCGCTGCTGATACTGGACGAGCCTACCTCCGGTCTGGACTCGACGGCGGCGCACCGCCTCGTGGTGACGCTGGGGTCACTGGCGAAGAAGGGCAAAAGTGTAATTACATCGGTGCACCAACCTTCCAGCCGTGTGTACCAGATGTTTGATAAGGTTGTGTTGCTATCGGAAGGACAGTGTTTGTACTTCGGCAAAGGAAGCGACGCCATGCGGTACTTTCAGTCGGTTGGTTTCGCGCCGTCTTTTGCGATGAATCCGGCGGATTTCCTGCTCGATCTCGCTAACGGTGTTAGCCATGTCGATGGTCAAAGTGAAAAAGATAGACCAAACATAAAGCAAAACCTAATCCATTCATACAACACAATACTGGGTCCCAAGGTAAAAGCTGCCTGCATGGACACTGCCAGTGTTCCTACAAAAAGCACAAACCCTTTGAGAAGCAGCTGTTCGAAAGAATGTAGACGTAGCAACAGGTTTAGCTTCTTTGATTGGTTTTACCAATTGAGTATCCTACTCCAGAGGAGCCTTAAAGAAAGAAAACACGAATCCTTTAACACTCTGAGAGTCTTTCAAGTTATTGCTGCAGCACTATTATCTGGTTTAATGTGGTGGCACTCAGATTACAGGAACATTCAAGATAGGCTTGGCCTACTCTTTTTCATTTCCATCTTCTGGGGAGTCTTCCCGTCTTTCAACTCAGTATTTGCATTCCCTCAAGAACGTGCCATCTTTATGAAAGAGCGTTCTTCTGGTATGTACACATTGTCCTCTTATTTCATGGCTCGAATTGTTGGAGACCTGCCCATGGAGCTTATTCTTCCCACGATTTTCCTCATTATTACATATTGGATGGGTGGATTAAAGCCAGATTTATGGGCTTTTGTGTTGACTTTGTTGGTTGTGCTTGGATACGTGATGGTGTCACAGGGTCTTGGGCTTGCTTTGGGTGCAGCAATAATGGATGCCAAACAGGCTTCCACAGTGGCAGCAGTGACAATGCTTGCATTTGTGTTGACAGGTGGATACTATGTCCATAAGGTGCCATCTTGCATGGCTTGGATCAAATATATATCCACAACTTTCTACTGTTATAGGCTGCTGACCAGAATCCAATATGAGGACGGGAAGAAGATATCATATCTATTAGGTTGCTATCATGGTGATAAGGGTGGCTGCAGGTTTGTTGAGGAGGATGTGGTGGGGCAAATTGGCACTCTGGGCTGCATTGGGGTGTTGCTTTTCATGTTTGTGTTCTACAGATTATTGGCTTACCTTGCATTGAGGCGCATCAAGAGTTGA 1983 0.5018 MPTPSPNGDSSNSNPPPKHTPQESRDLPPFLSSSYPITLKFMDVAYRLKIEDKQKSGGSIKSFFTTHPSSPSDQASTAAPPQERVILQGVTGIAHPGEILAVLGPSGSGKSTLLNALAGRLHGNGLTGTILANSSKLNKSVLRRTGFVTQDDILYPHLTVRETLVFCAMLRLPRTLPRAAKVAAAESAMAELGLRKCEHTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDSTAAHRLVVTLGSLAKKGKSVITSVHQPSSRVYQMFDKVVLLSEGQCLYFGKGSDAMRYFQSVGFAPSFAMNPADFLLDLANGVSHVDGQSEKDRPNIKQNLIHSYNTILGPKVKAACMDTASVPTKSTNPLRSSCSKECRRSNRFSFFDWFYQLSILLQRSLKERKHESFNTLRVFQVIAAALLSGLMWWHSDYRNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERSSGMYTLSSYFMARIVGDLPMELILPTIFLIITYWMGGLKPDLWAFVLTLLVVLGYVMVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWIKYISTTFYCYRLLTRIQYEDGKKISYLLGCYHGDKGGCRFVEEDVVGQIGTLGCIGVLLFMFVFYRLLAYLALRRIKS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01878 660 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 652 - -
Lapu7g01878 660 MobiDBLite consensus disorder prediction 1 31 - -
Lapu7g01878 660 MobiDBLite consensus disorder prediction 58 80 - -
Lapu7g01878 660 SMART AAA_5 96 287 IPR003593 GO:0016887
Lapu7g01878 660 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 310 IPR003439 GO:0005524
Lapu7g01878 660 Pfam ABC-2 type transporter 267 358 IPR043926 GO:0140359
Lapu7g01878 660 Pfam ABC-2 type transporter 394 599 IPR013525 GO:0016020|GO:0140359
Lapu7g01878 660 Pfam ABC transporter 88 238 IPR003439 GO:0005524
Lapu7g01878 660 Gene3D - 75 304 IPR027417 -
Lapu7g01878 660 MobiDBLite consensus disorder prediction 12 31 - -
Lapu7g01878 660 FunFam ABC transporter G family member 22 74 304 - -
Lapu7g01878 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 304 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01878 Lapu-Chr7 34791561 34798375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01878 97 346 Calmodulin-binding Proteins AT2G36910 25.984 1.67e-11 65.9