Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01873 ATGGAGTCATGCGTGCCTCCAGGATTTAGATTTCATCCAACGGAAGAGGAGCTTGTAGGGTACTATCTCAAGAGGAAGATAAACTCCCTAAAAATCGATCTAGATGTTATTGTTGAGATTGATCTGTACAAAATGGAACCATGGGATATACAAGATAGGTGCAAGCTAGGATATGAGCAACAGAATGAATGGTACTTTTTCAGTCACAAAGATAAGAAGTATCCTACTGGAACAAGAACTAACAGGGCCACTGCTGCTGGATTCTGGAAAGCAACTGGAAGGGACAAGGCTGTCATGTCCAAAAATAGGATCATAGGAATGAGGAAGACCTTGGTCTTCTACAAGGGACGTGCCCCTAATGGAAGGAAAACAGACTGGATTATGCATGAATATAGGCATCAAACCTCTGAACATGGTCCTCCACAGGCAAAAGGATGGGTTGTGTGCCGAGCATTTCGAAAGCCTAGTCCAAGTCACAGGCAAGGTTATGAGCCATGGTGCAGTAGTAGTAGCCATCAACAACACTTTTTCAGAGATCAAAGCTTTGCAAGACCCTTATCAATTTCTGATATTTTGAATGAGACAAATGTGCCTCATCACCCTGCTGAGGCTCCAAGTTTTAGCCACCCTTTCAGCTCAGATCAGCAACACTTTATTCTACCAAACCAAACTGTTATGGACAAACAACTCATTGAGCTTCCTCAGCTAGATAGTCCAACTGCAAGTTTTGCAATGAAGGAATGTAACCAACAAAACCACAATGGCCTCACAAGTGAGGAATATTGTAGTGATGAAAGGAGCAATAGCAGTGCACAAGGCATCGATTGGAAGAGTTTGGACAACTTGTTCGGCTCACAATTCAGTGACACAGCTTATTTTTCGCATCCAAACTTGCCCTTGATGATGCCCCACAATAACCATGATCAAGCTAGTCATATCCTAGGATGCTTCCCTGATTCATAG 963 0.4299 MESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQAKGWVVCRAFRKPSPSHRQGYEPWCSSSSHQQHFFRDQSFARPLSISDILNETNVPHHPAEAPSFSHPFSSDQQHFILPNQTVMDKQLIELPQLDSPTASFAMKECNQQNHNGLTSEEYCSDERSNSSAQGIDWKSLDNLFGSQFSDTAYFSHPNLPLMMPHNNHDQASHILGCFPDS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01873 320 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
Lapu7g01873 320 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Lapu7g01873 320 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Lapu7g01873 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 246 - -
Lapu7g01873 320 FunFam Nac domain-containing protein 86 14 157 - -
Lapu7g01873 320 Gene3D NAC domain 14 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01873 Lapu-Chr7 34711724 34716467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01873 1 320 NAC Transcription Factor Family AT1G71930 55.162 2.08e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu7g01873 NAM 7.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01873 - - var:108325420 648.662