Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01868 ATGGGTTCCTACAGTGCAGGTGATGTAGTTGTGACAACCTCTTCCAAAGAAGTAGAGGATGAGGCTTTCCTTTATGCTTTGTTACTTTGCACTAGTCAGGTGTTTCCTTCAGTGCTCAATGCTGCTATTGAGCTTAACTTGTTTGAGATCATAGCAAAGTCAACACCACCAAATGCAGCCATATCAGTGTTAGAAATTGCTTCTAAGCTACCAACCCAACACCTAGATGGGCTCGAGCGCATGCTGCGTTTGCTTGCTAACTATTCTCTTCTCACTTGTTCCACTCACACCAATGAAGATGGTAGCACTGAGAGAACTTACGGACTCTCACCTGTTGGAAAATACTTTGTCAGTGATGAGACTAGGGGTTGTTTGCGTTCCTTCACAGCATTTTCCCACCATCCTACAGTGTTAAAACTTTGGCCGAATTTTAAGGAAGTAATAATTGATTGCGAGGACGACCTATGCAAGAAGGTTCATGGAATGTCTGTGTACCAATGCACTGAAAGGGATCCACAACTGAATTACATTTTCAACAAATCAATGGCTAATATTTGCACCTTAGAAATGAATAGGATTCTTGAAGAGTATAAAGGATTTGAAGGAGTGTCAAATCTGGTTGATGTGGGAGGTTGTACAGGGCAAACTCTCCACATGATAATCTCCAAGTACTCTACAATTAAGGGTATTAACTTTGATTTGCCTGAAGTTGTTGAAAAAGCGCCATCTTATCCAGGGATACAACATGTAGGAGGAGATATGTACCATCATGTACCAAAGGGTGATGCCATAATTCTCAAGGCTGTGTTGCACAACTGGTCAGATGAACAATGCTTAAGCATTTTGAGGAACTGTCATAATGCACTACCGCAGAATGGAAAGGTGATTGTGATAGAGTTTATAGTAGCCGAAGAAGCATCAGAGTCAAATATATCAAAACTTGTTTCCACCCTCGACAGCCTCATGTACATGACAAGTGGTGGGAAGGAAAGAAGTGAAAAGGAGTACGAGGGATTGTGCAAGCTTTCTGGATTCTCAAGATTTCAAGTTGTCTGTCGTGCGTTTTCTGCCTTAGCAACCATGGAATTTCGCAAATAA 1098 0.4162 MGSYSAGDVVVTTSSKEVEDEAFLYALLLCTSQVFPSVLNAAIELNLFEIIAKSTPPNAAISVLEIASKLPTQHLDGLERMLRLLANYSLLTCSTHTNEDGSTERTYGLSPVGKYFVSDETRGCLRSFTAFSHHPTVLKLWPNFKEVIIDCEDDLCKKVHGMSVYQCTERDPQLNYIFNKSMANICTLEMNRILEEYKGFEGVSNLVDVGGCTGQTLHMIISKYSTIKGINFDLPEVVEKAPSYPGIQHVGGDMYHHVPKGDAIILKAVLHNWSDEQCLSILRNCHNALPQNGKVIVIEFIVAEEASESNISKLVSTLDSLMYMTSGGKERSEKEYEGLCKLSGFSRFQVVCRAFSALATMEFRK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01868 365 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171
Lapu7g01868 365 PANTHER O-METHYLTRANSFERASE 29 345 IPR016461 GO:0008168
Lapu7g01868 365 Pfam Dimerisation domain 38 86 IPR012967 GO:0046983
Lapu7g01868 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 352 IPR029063 -
Lapu7g01868 365 Gene3D Vaccinia Virus protein VP39 117 365 IPR029063 -
Lapu7g01868 365 FunFam Caffeic acid O-methyltransferase 119 365 - -
Lapu7g01868 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 365 IPR016461 GO:0008168
Lapu7g01868 365 Gene3D - 6 116 IPR036388 -
Lapu7g01868 365 FunFam Caffeic acid 3-O-methyltransferase 5 116 - -
Lapu7g01868 365 PIRSF O-mtase 5 365 IPR016461 GO:0008168
Lapu7g01868 365 CDD AdoMet_MTases 205 302 - -
Lapu7g01868 365 SUPERFAMILY "Winged helix" DNA-binding domain 20 120 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01868 Lapu-Chr7 34671635 34673112 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01868 13 355 Monolignol Biosynthesis Gene Families AT5G54160 46.686 4.08e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01868 - - gmx:100798347 456.447