Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01863 ATGGAAGATTCAGAGGAGGATGAGCTTTTGAATCTTAGCCTTTCAGTTGCTGCGGATAGGGAAAGGAAAAAGAAGGGAAAGATAATTAGGGAACATAATGTCTCTATGAGTAGTACTACTGCTAGCAACTCCTATGAAAGCTATGAAGGGAAGATATTTAGGCTTCTCCAAATGAGGGAGCAGATGCTGAGACAAGACCATAGGAGGAAAGGAGTTGTAGAAGATGGGAATGGCCTCCCTTTGATCCATTTGCTGCTCTCAACTGCCACTGCTGTTGATGACAACAACTTGGATTCATCCTTAGAGAATCTCACTGACTTATACCAAACTGTTTCCCTAACAGGTGACTCGGTTCAGCGTGTGGTGGCTTATTTTGCTGATGGTTTGGCTGCAAGGCTTCTCACAAGGAAATCCCCATTCTATGACATGCTCATGGAGGAACCAACAACTGAGGAAGAGTTCCATGCATTCACAGATCTCTACAGGGTTTCACCTTACTATCAATTCGCTCATTTCACAGCGAACCAAGCTATCTTGGAGGCCTTTGAGAAAGAGGAAGAGAGGAACAACCGCGCTTTGCATGTCATTGATTTTGATGTCTCCTATGGCTTCCAGTGGCCCTCTCTCATTCAGTCTCTCTCAGAGAAGGCAACCACCGGTAACCGCATATCCCTAAGGATAACCGGATTTGGGAAGAACCTCAAAGAGCTTCAAGAAACTGAGTCTAGATTGGTTAGTTTCTCAAAGGGTTTTGGTAGTCTTGTGTTTGAATTCCAAGGTCTGCTAAGAGGCTCAAGGGTCATCAACCTAAGGAAGAAAAAAAATGAAACGGTGGCTGTCAACTTGGTTTCTTATCTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGGATTTGTTCATTCCCTTAACCCCTCCATTGTTGTGCTGGTGGAGCAAGAGGGTAGCAGGAGTCCTAGGAGCTTCTTGTCAAGGTTCACAGACTCCTTGCACTACTTTGCAGCCATGTTTGATTCACTGGATGATTGCCTCCCACTAGAGAGTGCTGAGAGGTTGAGAATTGAGAAGAAGCTTTTGGGGAAAGAGATCAAAAGCATGCTCAACAATGACGTGGACGGTGTGGATTGCCCAAAGTATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGGTTCGTTGCCACCAAAATAAGCTCAAAGTCTATGATCCAAGCAAAACTGTTGCTGAAGATGAGGACCCATTATTGTCCTCTTCAGTTTGAGGAAGAAGGAGGTGGGGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTGCTCACAGTCACAGCATGGCAATCAGTCTGA 1386 0.4473 MEDSEEDELLNLSLSVAADRERKKKGKIIREHNVSMSSTTASNSYESYEGKIFRLLQMREQMLRQDHRRKGVVEDGNGLPLIHLLLSTATAVDDNNLDSSLENLTDLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTTEEEFHAFTDLYRVSPYYQFAHFTANQAILEAFEKEEERNNRALHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKNLKELQETESRLVSFSKGFGSLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNNDVDGVDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVTAWQSV* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01863 461 Pfam GRAS domain family 81 459 IPR005202 -
Lapu7g01863 461 Coils Coil 351 371 - -
Lapu7g01863 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 65 454 IPR005202 -
Lapu7g01863 461 ProSiteProfiles GRAS family profile. 72 459 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01863 Lapu-Chr7 34635330 34636715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01863 77 459 GRAS Transcription Factor Family AT1G14920 33.838 5.80e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu7g01863 GRAS 5.5e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01863 - - gmx:100809458 843.573