Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01861 ATGGGGGAAGCCAATGGTGTGACCAAAAATAACCTGTTTACAACTTGTCCTCAAAAAAGTGAGGATGATGCCTGTCTATCTGCATTTCTGCTTAGTTCTACTATAGTGTACCCTGCAGTGCTGAATGCTGCTATTGATCTCAACTTGTTTGAGATCATAGCCAAGGCAACACCACATGGTTCATTCATGTCATCACATGAAATTGCTTCTAAGCTCCCAAACCAACACCCTGACTTGCCTAATAGGCTTGAACGCATGCTGCGTTTGCTTGCTAGTCATTCTGTTCTTACTAGTTCCTCTCGCACCACACAACATGGTGCCACTGAGACAGTTTATGGACTCTCACAAGTTGGACGACACTTTGTCCCTGGTGAAGCTAAGGGCTACTATGCTTCATTCGCATCCTTTCTCTGTTGTCCTGCACTCTCACCAGTTTGGATGAATTTCAAGGAAGCAGTGGCTGATGCAGACGCTGACTTGTTTAAGAAAATTCATGGAGTAACAACATACCAGTACATGGAAAAGGATCCAAAAGTGAACCAAATATTTAACAAGTCAATGGCGGAGTTGTCTGGAATAGATATACATAGAATACTTGAAAGATATTCTGGATTTGAGGGAATATCAACCTTGGTTGATGTAGGAGGTGGAAATGGAAAAAATCTAAATCTTATCGTCTCCAAATACCCTTCAATTAAAGGAATTAATTTTGATCTTCCTCAAGTGGTTGAAAATGCAGCACCGCTTCCAGGGGTTGAGCTGGTTGGAGGAGATATGTTTGCAAGCATCCCACAGGGTGACGCGGTGATACTAAAGATGGTGTTGCACAATTGGTCTGATGAAAAGTGCATAGAAATTTTAAGCAATTGTCACAAAGCATTATTTCCAAATGGGAAGGTGGTTGTTGTGGAGTTCATAATGCCAGAAGAACCAGAACCAACTGAACAATCTCAGCTTGTGTCCACCCTTGACAACCTTATGTTTATCACAGCTGGTGGACAGGAAAGAACTGAGAAACAATACCAGAATCTGTGCAAGCTCGCTGGATTTTCAAAATTCCATGTTGCTTGTTATGCATCCTCTAGTCCAGCAGTGATGGAATTCTACAAATAA 1113 0.4187 MGEANGVTKNNLFTTCPQKSEDDACLSAFLLSSTIVYPAVLNAAIDLNLFEIIAKATPHGSFMSSHEIASKLPNQHPDLPNRLERMLRLLASHSVLTSSSRTTQHGATETVYGLSQVGRHFVPGEAKGYYASFASFLCCPALSPVWMNFKEAVADADADLFKKIHGVTTYQYMEKDPKVNQIFNKSMAELSGIDIHRILERYSGFEGISTLVDVGGGNGKNLNLIVSKYPSIKGINFDLPQVVENAAPLPGVELVGGDMFASIPQGDAVILKMVLHNWSDEKCIEILSNCHKALFPNGKVVVVEFIMPEEPEPTEQSQLVSTLDNLMFITAGGQERTEKQYQNLCKLAGFSKFHVACYASSSPAVMEFYK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01861 370 PIRSF O-mtase 6 370 IPR016461 GO:0008168
Lapu7g01861 370 FunFam Caffeic acid O-methyltransferase 124 370 - -
Lapu7g01861 370 Gene3D - 5 121 IPR036388 -
Lapu7g01861 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 370 IPR016461 GO:0008168
Lapu7g01861 370 FunFam Caffeic acid 3-O-methyltransferase 8 121 - -
Lapu7g01861 370 SUPERFAMILY "Winged helix" DNA-binding domain 20 125 IPR036390 -
Lapu7g01861 370 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Lapu7g01861 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 361 IPR029063 -
Lapu7g01861 370 Gene3D Vaccinia Virus protein VP39 124 370 IPR029063 -
Lapu7g01861 370 PANTHER O-METHYLTRANSFERASE 31 360 IPR016461 GO:0008168
Lapu7g01861 370 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01861 Lapu-Chr7 34603111 34604789 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01861 18 359 Monolignol Biosynthesis Gene Families AT5G54160 44.023 1.05e-99 298