Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01859 ATGTCTGGCAACTCTAATTGCAGTGTTTACATAGGCAATCTAGATGAGAGGGTGACTGACAGGGTCTTGTATGATATATTAATTCAAGCGGGAAGAGTGGTAGATTTGTACATTCCTAAAGATAAGGAATCTGAGAAACCAAAAGGTTTTGCCTTTGCAGAATACGAAACTGAGGAGATTGCAGACTATGCTGTCCGACTTTTCTCCGGCCTTGTAACTCTCTACAACAGAACACTCAAGTTTGCGATATCTGGGAGAGACAAAACTTCCCTCAATGGCTCTACAGCAATTACCCCCTCATCAAATTCTTCTCAAAGGCCAAGGCCATATGCAGTCCCAATAAATAATTCAGAAAATTTTCAGCACCCTGCTAGGCTATCAACTTCTGACCGATATTCAGATTATGCAGTAAATTATTCCCAAGTTCCTCCTATTCGTGTAACTGACCAATCTAGTGGGAATGGATCTCACTATAGTGGCAACAATTATGAATACAGCAGGAGAGCTTTTGGGGCAACATTGGATAGCATTAGCCGTAGTAGGTCACGCCGCTTTGATAGAAGTAGCCCAATCACTTACCCATCTTACTAG 591 0.4196 MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLYIPKDKESEKPKGFAFAEYETEEIADYAVRLFSGLVTLYNRTLKFAISGRDKTSLNGSTAITPSSNSSQRPRPYAVPINNSENFQHPARLSTSDRYSDYAVNYSQVPPIRVTDQSSGNGSHYSGNNYEYSRRAFGATLDSISRSRSRRFDRSSPITYPSY* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01859 196 Gene3D - 2 94 IPR012677 -
Lapu7g01859 196 SMART rrm1_1 8 82 IPR000504 GO:0003723
Lapu7g01859 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Lapu7g01859 196 MobiDBLite consensus disorder prediction 92 124 - -
Lapu7g01859 196 MobiDBLite consensus disorder prediction 143 162 - -
Lapu7g01859 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Lapu7g01859 196 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 193 - -
Lapu7g01859 196 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01859 8 89 Eukaryotic Initiation Factors Gene Family AT1G49760 30.488 9.73e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01859 K12831 - gmx:100803118 341.273