Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01853 ATGGACTACAAACTCAAAACCACAACCACAACTACAACAGCAACACCTTCTCCACCAATCCCAATCCATGTTCCCACTATGCTCTCAAACTCTCCTCCATCTTCATCTTCCTCACCTCCCTCGCACTCTCCCACACCTTTCCCTTCACCCTCTCAGGGCTCTCCCTCTGCTGCTCCTCCCTCTCCACCGCCGCCGGTGGTGGTTAGCCCCTGTGCTGCTTGCAAGATCCTCCGCCGCAGGTGCGTCGAGAAGTGTGTCCTGGCTCCCTATTTCCCTCCCACTGATCCCCTCAAATTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAGCTACCAGAGTCGCAGAGAGCAGATGCTGTGAGCAGCATGGTGTATGAGGCAAATGCTAGGATTAGAGACCCAGTTTATGGGTGTGCAGGTGCAATATGCCAACTTCAGAAGCAAGTTAGTGAGCTTCAAGCACAGTTGGCGAAAGCACAGGCTGAGCTAGTGAACATGCAGTGCCAACAAGCGAATTTGGTGGCTCTAATTTGCATGGAAATGAGTCAATCACAGGAGCAGCACATGGTGCAGCCTCAACCTCACGTTGACATGAGCTGCTTCATAGAGGACAACAGTTTTGGAACTGCTTGGGAGCCTCTCTGGACATGA 672 0.5193 MDYKLKTTTTTTTATPSPPIPIHVPTMLSNSPPSSSSSPPSHSPTPFPSPSQGSPSAAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQEQHMVQPQPHVDMSCFIEDNSFGTAWEPLWT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01853 223 Pfam Lateral organ boundaries (LOB) domain 70 167 IPR004883 -
Lapu7g01853 223 MobiDBLite consensus disorder prediction 1 17 - -
Lapu7g01853 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 69 195 - -
Lapu7g01853 223 MobiDBLite consensus disorder prediction 37 62 - -
Lapu7g01853 223 ProSiteProfiles LOB domain profile. 69 170 IPR004883 -
Lapu7g01853 223 MobiDBLite consensus disorder prediction 1 62 - -
Lapu7g01853 223 Coils Coil 149 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01853 Lapu-Chr7 34507668 34509306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01853 66 223 AS2 family AT1G07900 72.393 2.95e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu7g01853 LOB 2.8e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01853 7 34507668 34509306 Lapu7g01853 7 34507668 34509306 ECH