Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01850 ATGGGGAGGAAAGGGTGGTTTTCTTCAGTGAAGAAAGTTTTCTTTTCTGATTCCAAAAAGGAACAGAAACATCCTCATCCTCATCCTCATCAGCAACAACAACATCAACATCACAAGTCAAAGTTAGGATGTTTTGGGGCTTATCACCCTGATGATCTAGAAGGAGCCCCAATTGCTGTTGTTCCGTCACTTCCACCAAGAAAAGATACCACACCAAGAATTGTGCCAGAGAATGAACAGAACAACCAAGCCTTTTCTTTGGTTTTGGCCACTGCTGTGGCTGCAGGGGCTGCTGTTGCTGCTGCTGCAGAGGTTGCTCGTCTCTCGAACACGCCTCGTCAAAATGGAAACGCGAATCAAGAAATGGCTGCTACTACAATTCAAACAGCCTACCGTGGATATTTGGCTAGAAGATCCTTGCGAGGCTTGAGAGGTTTGGCGAGGCTGAGAACATTGGTGCAAGGGCAATCCGTTCAAAGGCAAGCAGCTACTACCTTGCAATGCATGCAAACTCTTTCACGGTTGCAGTCTCAGGTTCGTGCAAGGAAGGTCAGAATGTCTGAGGAGAATCAGGCTCTGAACCGGCAACTGCAGCAGAAACGTGAAAGGGAATTGGACAAGTTGCAAGCTAATCAAATTGGAGAAAAATGGGATGATAGCTCGAAATCAAAGGAGCAAGTTGAGGCAAAATTGTTGAACAGACAAATAGCAGCTATGAGAAGAGAGAAGGCTATGGCTTATGCATCTACACATCAGCAAACATGGAGGAACTCTTCAAAATCTGCTACAAATGCTACATTTATGGATCCAAACAATCCCCACTGGGGCTGGAACTGGCTAGAGCGATGGATGGCTACTAGGCCATGGGAGGGTCAAAACACTACCTACCACATTGGCCATGCATCTGCCAAGAGTGGTGCAAGAAACACTATGTCAGTTGGTGAAATCACAAAATTATATTCTCTCCGTGACCAGAACAATGATGTGATAACCACCCCATCAAACCAAAAACCAACTCGTCCTCGCAGCAGCGATTCCCCTCCAAAAAGAGCCCCAAAGGCCCCACTAGCCAATGGAACAAGGCCAAAGGTATCAGGTGGTTCATGGGGTGGGGATGTTGATTCAAAAACCATGTTCAACAAAACCCTAGAAAACAATCGCAGGCACAGCATTGGAGGGTCACCAGTGAGAGATTACGAGAGCCATTCAAGCGCTTCACCTGCTTTCCCAAGTCACACAACACCATCCACCAAGGTTGCAAAGGCCAAGCCACCATCCAAAGTGAGAAGTGCATCATTTGCTGCACAAAGAAACGGAACACCTGAAAAAGCAGCTTCTGCTCCTCCAAAGAAGAGACTCTCTTTCCCTGCTTCTCCAGCCGGTGCAAGAAGGTATTCTGTTTCAACCAGGCCGGGAAATGTGGTTTCCAACAAGAGTGTTGCTAATGCTACAATCCCTGAGGAGAAAATGAGAGTGAGAAGGTAG 1485 0.4694 MGRKGWFSSVKKVFFSDSKKEQKHPHPHPHQQQQHQHHKSKLGCFGAYHPDDLEGAPIAVVPSLPPRKDTTPRIVPENEQNNQAFSLVLATAVAAGAAVAAAAEVARLSNTPRQNGNANQEMAATTIQTAYRGYLARRSLRGLRGLARLRTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQALNRQLQQKRERELDKLQANQIGEKWDDSSKSKEQVEAKLLNRQIAAMRREKAMAYASTHQQTWRNSSKSATNATFMDPNNPHWGWNWLERWMATRPWEGQNTTYHIGHASAKSGARNTMSVGEITKLYSLRDQNNDVITTPSNQKPTRPRSSDSPPKRAPKAPLANGTRPKVSGGSWGGDVDSKTMFNKTLENNRRHSIGGSPVRDYESHSSASPAFPSHTTPSTKVAKAKPPSKVRSASFAAQRNGTPEKAASAPPKKRLSFPASPAGARRYSVSTRPGNVVSNKSVANATIPEEKMRVRR* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01850 494 Gene3D iswi atpase 118 144 - -
Lapu7g01850 494 MobiDBLite consensus disorder prediction 17 42 - -
Lapu7g01850 494 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Lapu7g01850 494 MobiDBLite consensus disorder prediction 324 342 - -
Lapu7g01850 494 Coils Coil 222 242 - -
Lapu7g01850 494 MobiDBLite consensus disorder prediction 469 483 - -
Lapu7g01850 494 MobiDBLite consensus disorder prediction 397 420 - -
Lapu7g01850 494 PANTHER IQ-DOMAIN 5-RELATED 1 458 - -
Lapu7g01850 494 MobiDBLite consensus disorder prediction 324 494 - -
Lapu7g01850 494 Coils Coil 183 203 - -
Lapu7g01850 494 SMART iq_5 119 141 IPR000048 GO:0005515
Lapu7g01850 494 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01850 Lapu-Chr7 34481373 34484228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01850 1 466 IQD Protein Family AT5G03040 41.336 1.32e-90 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01850 - - vun:114190307 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01850 7 34481373 34484228 Lapu7g01850 7 34481373 34484228 ECH