LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g01843	ATGATGGGTTATTTTTCAAGATTCTATCTTGTTTTGCTTTTGTCCATTTGTGGAGTGGTTTCTTTGGCTTCCCCCATTGAAGATCAGAAGAGAGATCGAATTACTCAGCTGCCAGGACAGCCAAAGAATGTGGGGTTTGGTCAGTATTCTGGCTATGTGACTGTGAATGAGCAAAGTGGGAGAGCACTGTTTTACTGGTTGGTGGAGGCACCACTGAGTCGTGGACCACGGTCAAGGCCACTAGTGTTGTGGCTCAATGGTGGCCCTGGATGTTCCTCTATTGCTTATGGTGCATCTGAAGAAATTGGTCCTTTTCGCATTAGGCCTGATGGCAGGTCGCTTTACTTGAACCCTTATGCTTGGAACAAGTTAGCAAATGTACTGTTCCTTGATTCTCCAGCTGGTGTTGGTTTTTCATATTCGAATAAAACAACAGATCTGTATACATTTGGTGACCAGAGAACAGGTAATGTATTATGTAGTTGTTCTTGTGTACATCTGCGATCTGACTTTGCAGCTGAAGATACATATGCTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTTTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGTCACAAATTGTTTACAGGAAAAATAAAGGAATCAAGAATCCAATTATAAATTTTAAGGGATTTATGGTTGGTAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCCACGTATAGGATGCTAAAAATTGCCTGCAATTTTGGGTCCTCTCAGCATCCATCAGTGCAGTGCATGCAGGCTCTCAGAGTTGCAGCTTTGGAGCAGGGAAACATAGATCCATATAGCGTTTATACACAGCCCTGTAACAATACAGCATCACTCAGACGCGGCTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAACCGTCCAGAAGTTCAGAAGGCATTTCATGCCAATGTAACTGGGATTCCTTATGCATGGAAAGCATGCAGTGATATTGTTGGGAACTATTGGACTGATTCTCCGTTATCTATGCTTCCTATATATCAAGAACTTATTAGTGCTGGTCTCCGAATATGGGTCTACAGTGGAGACACTGATGCTGTGGTTCCAGTGACTGCTACTCGATATTCAATTGATGCCTTGAAGCTACCTACCATCATCAATTGGTACCCTTGGTATGATAGTGGCAAGGTTGGTGGTTGGAGTCAAGTTTATAAAGGTTTGACAATGGTTACAGTAAGAGGAGCTGGACACGAGGTTCCTCTTCATAGGCCCCGCCAAGCATTCATTCTTTTTAGTTCTTTCTTGGAGAACAAGTACATGCCATCCTCAAGTTAG	1434	0.4191	MMGYFSRFYLVLLLSICGVVSLASPIEDQKRDRITQLPGQPKNVGFGQYSGYVTVNEQSGRALFYWLVEAPLSRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGRSLYLNPYAWNKLANVLFLDSPAGVGFSYSNKTTDLYTFGDQRTGNVLCSCSCVHLRSDFAAEDTYAFLVNWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYRKNKGIKNPIINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLKIACNFGSSQHPSVQCMQALRVAALEQGNIDPYSVYTQPCNNTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKAFHANVTGIPYAWKACSDIVGNYWTDSPLSMLPIYQELISAGLRIWVYSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTMVTVRGAGHEVPLHRPRQAFILFSSFLENKYMPSSS*	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g01843	477	Gene3D	-	376	469	-	-
	Lapu7g01843	477	Gene3D	-	329	365	-	-
	Lapu7g01843	477	SUPERFAMILY	alpha/beta-Hydrolases	29	474	IPR029058	-
	Lapu7g01843	477	ProSitePatterns	Serine carboxypeptidases, serine active site.	197	204	IPR018202	GO:0004185
	Lapu7g01843	477	FunFam	Carboxypeptidase	376	470	-	-
	Lapu7g01843	477	Gene3D	alpha/beta hydrolase	26	315	IPR029058	-
	Lapu7g01843	477	PRINTS	Carboxypeptidase C serine protease (S10) family signature	130	140	IPR001563	GO:0004185\|GO:0006508
	Lapu7g01843	477	PRINTS	Carboxypeptidase C serine protease (S10) family signature	440	453	IPR001563	GO:0004185\|GO:0006508
	Lapu7g01843	477	PRINTS	Carboxypeptidase C serine protease (S10) family signature	117	129	IPR001563	GO:0004185\|GO:0006508
	Lapu7g01843	477	PRINTS	Carboxypeptidase C serine protease (S10) family signature	183	208	IPR001563	GO:0004185\|GO:0006508
	Lapu7g01843	477	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	34	457	IPR001563	GO:0004185\|GO:0006508
	Lapu7g01843	477	FunFam	Carboxypeptidase	28	307	-	-
	Lapu7g01843	477	ProSitePatterns	Serine carboxypeptidases, histidine active site.	440	457	IPR033124	GO:0004185
	Lapu7g01843	477	Pfam	Serine carboxypeptidase	38	470	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g01843	Lapu-Chr7	34397909	34403454	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g01843	358	471	Calmodulin-binding Proteins	AT2G22960	29.565	2.33e-12	63.9

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu7g01843	7	34397909	34403454	Lapu7g01843	7	34397909	34403454	ECH