Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01843 ATGATGGGTTATTTTTCAAGATTCTATCTTGTTTTGCTTTTGTCCATTTGTGGAGTGGTTTCTTTGGCTTCCCCCATTGAAGATCAGAAGAGAGATCGAATTACTCAGCTGCCAGGACAGCCAAAGAATGTGGGGTTTGGTCAGTATTCTGGCTATGTGACTGTGAATGAGCAAAGTGGGAGAGCACTGTTTTACTGGTTGGTGGAGGCACCACTGAGTCGTGGACCACGGTCAAGGCCACTAGTGTTGTGGCTCAATGGTGGCCCTGGATGTTCCTCTATTGCTTATGGTGCATCTGAAGAAATTGGTCCTTTTCGCATTAGGCCTGATGGCAGGTCGCTTTACTTGAACCCTTATGCTTGGAACAAGTTAGCAAATGTACTGTTCCTTGATTCTCCAGCTGGTGTTGGTTTTTCATATTCGAATAAAACAACAGATCTGTATACATTTGGTGACCAGAGAACAGGTAATGTATTATGTAGTTGTTCTTGTGTACATCTGCGATCTGACTTTGCAGCTGAAGATACATATGCTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGAATTTTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGTCACAAATTGTTTACAGGAAAAATAAAGGAATCAAGAATCCAATTATAAATTTTAAGGGATTTATGGTTGGTAATGCTGTTACTGATGATTATCATGATTATGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCCACGTATAGGATGCTAAAAATTGCCTGCAATTTTGGGTCCTCTCAGCATCCATCAGTGCAGTGCATGCAGGCTCTCAGAGTTGCAGCTTTGGAGCAGGGAAACATAGATCCATATAGCGTTTATACACAGCCCTGTAACAATACAGCATCACTCAGACGCGGCTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATATGATCCCTGTACTGAAAGGTATTCTGATTTGTATTTCAACCGTCCAGAAGTTCAGAAGGCATTTCATGCCAATGTAACTGGGATTCCTTATGCATGGAAAGCATGCAGTGATATTGTTGGGAACTATTGGACTGATTCTCCGTTATCTATGCTTCCTATATATCAAGAACTTATTAGTGCTGGTCTCCGAATATGGGTCTACAGTGGAGACACTGATGCTGTGGTTCCAGTGACTGCTACTCGATATTCAATTGATGCCTTGAAGCTACCTACCATCATCAATTGGTACCCTTGGTATGATAGTGGCAAGGTTGGTGGTTGGAGTCAAGTTTATAAAGGTTTGACAATGGTTACAGTAAGAGGAGCTGGACACGAGGTTCCTCTTCATAGGCCCCGCCAAGCATTCATTCTTTTTAGTTCTTTCTTGGAGAACAAGTACATGCCATCCTCAAGTTAG 1434 0.4191 MMGYFSRFYLVLLLSICGVVSLASPIEDQKRDRITQLPGQPKNVGFGQYSGYVTVNEQSGRALFYWLVEAPLSRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFRIRPDGRSLYLNPYAWNKLANVLFLDSPAGVGFSYSNKTTDLYTFGDQRTGNVLCSCSCVHLRSDFAAEDTYAFLVNWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYRKNKGIKNPIINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLKIACNFGSSQHPSVQCMQALRVAALEQGNIDPYSVYTQPCNNTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKAFHANVTGIPYAWKACSDIVGNYWTDSPLSMLPIYQELISAGLRIWVYSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDSGKVGGWSQVYKGLTMVTVRGAGHEVPLHRPRQAFILFSSFLENKYMPSSS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01843 477 Gene3D - 376 469 - -
Lapu7g01843 477 Gene3D - 329 365 - -
Lapu7g01843 477 SUPERFAMILY alpha/beta-Hydrolases 29 474 IPR029058 -
Lapu7g01843 477 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Lapu7g01843 477 FunFam Carboxypeptidase 376 470 - -
Lapu7g01843 477 Gene3D alpha/beta hydrolase 26 315 IPR029058 -
Lapu7g01843 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Lapu7g01843 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 440 453 IPR001563 GO:0004185|GO:0006508
Lapu7g01843 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Lapu7g01843 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Lapu7g01843 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 457 IPR001563 GO:0004185|GO:0006508
Lapu7g01843 477 FunFam Carboxypeptidase 28 307 - -
Lapu7g01843 477 ProSitePatterns Serine carboxypeptidases, histidine active site. 440 457 IPR033124 GO:0004185
Lapu7g01843 477 Pfam Serine carboxypeptidase 38 470 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01843 Lapu-Chr7 34397909 34403454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01843 358 471 Calmodulin-binding Proteins AT2G22960 29.565 2.33e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01843 K16297 - gmx:100812000 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01843 7 34397909 34403454 Lapu7g01843 7 34397909 34403454 ECH