Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01822 ATGGCAAGCAAGTGGAAGAAAGCCAAGGTCGCGCTTGGTCTCAACCTCTGCATGTTCGTTCCCAGAACGTTAGACGACGATTCGCCGCCCCACACGGTGGCTTCCGAGCGCCTCTCCGACGCCGCTCTACTTTCTCCGGTCAGCTGGAACACCAGCTCTTCCCGCCCCTCCACGCCACTTTCCTCTTTTCATGGCTTGAAACTTTCCAAAAGTAGCAGCAAATCCTCCAAGCAAACCTGCTCAATATGCTTAACCAAAATGAAGCAAGGATCCGGCCATGCTATATTCACTGCAGAATGTTCACATTCCTTCCATTTCCACTGCATTGCCTCAAATGTAAAACATGGAAACCAAATATGTCCAGTGTGTAGAGCAAAGTGGAAGGAAATACCCTTATCGGGTCCCAGTTTGGATCCCATCCCTGGCAGAGTTTCACCAAGTCCAATCAATTGGCCCCAAAATGATGCTTTGATGGCAGTGGTCCACCGTCTACCCCTGCCTCATCCTCACCGAGATTTAAATAGGAGGCATGTTGTGCCACTTTATCAGGCTTCTGAGCCAGGCATATTTGACGATGATGAATCCTTGAATCATCAACATGTGTTTACTGAGAGAAGTCCTTGCATTGAGAATACTGAGGCTGCTAGAGCAATGGAGATTAAAACGTTCCCAGAAGTATCTGCTGCTCCGGGATCCAAGACTCATTCTAACTTCACAGTTTTGGTTCATCTCAAAGCTGCTGCTGCTGCTATAGACGCAGCTGCAGTCAAAAGAACAAATCTTAGTAGAAACCAGGCAAATTTGGCACAGATTTCTCAGACTCCACGCGCCCCTGTCGACTTGGTCACAGTGCTTGATGTGAGTGGTAGCATGGCTGGAACCAAGCTTGCATTACTCAAAAGAGCGATGGGATTTGTCATACAGAACCTGGGCTCTAATGACCGACTCTCTGTTATTGCTTTTTCTTCCACAGCTCGCCGCCTATTTCCTTTGTGCAGAATGACTGATTCTGGGCGTCAGCAGGCATTGCAAGCCGTTAATTCTTTGGTTGCAAATGGTGGTACCAATATCGCGGAAGGGCTGAGAAAAGGTGCCAAGATAATGGAAGATCGAAAGGAAAAGAATCCAGTTGCCAGTATTATACTGTTGTCCGATGGTCAAGATAATTACACTGTCAATGGCTCTGGAACTAACCAGCCTCGACCAAATTACCAGTTTCTTCTGCCCTCTTCTATCAGTGGTGGTGATAATTCAGGATTTCAAATTCCTGTGCATGCTTTTGGATTTGGTGCGGATCATGATGCTTCACTAATGCACTCAATCTCAGAAATTTCTGGTGGCACATTTTCTTTCATTGAGACTGAAGCTGTGTTACAGGACGCATTTGCACAATGCATCGGAGGACTTCTGAGCGTAGTTGTTCAGGAGCTTCAAGTGGGAATTGAGTGTATAGACCCAAATCTCAGTCTTGTCTCACTAAAAGCAGGGAGTTATCCAAGCCGAGTGATGGCTGATGGACGCAAAGGATTGATTGAAGTAGGAGACCTGTATGCCGATGAAGAGAGGGATTTTCTAGTTTCACTTAATGTCCCAGCTACATCTGGCAATGAAACATCATTGATAAAGGTGAAATGTATATACAAGGACCCCTTAACTCAGGAAACTTCAACAATGGAAAGCAAGGAAGTTAAGATTGAGCGGACTGAAATCGCAGGGCAGGTAGTAATGTCACTGGAAGTGGACAGACAGCGCAACAGGCTCCAAGCAGCTGAGGCAATGGCCCAGGCTCGTGTTGCAGCTGAACAGGGGGACCTTAGTGGAGCAATATTAATCCTTGAAAACTTCAGAAAGATGCTCTCGGAGACTGTTTCGGCCAAATCTCACGACCGCCTATGTGTTGCGTTGGATGCTGAGCTTAAGGAAATGCAAGAGCGGATGGCGAGTAGGCATGTGTACGAGGCATCTGGGAGAGCCTATATACTTTCTGGATTGAGTTCACACTCGTGGCAAAGAGCAACAGCAAGAGGTGATTCCACTGATAGGTCAAGTCTTGTTCAGGCATATCAGACACCATCAATGGCTGAGATGCTTACTCGATCTCAGGCCATGTTACTCGGTAGTCCATCAGGGCAGAGGCTTATCCAGCCACTGTTGTCAGTCAGATCACAACCTAGCCCAAGGTGA 2184 0.4716 MASKWKKAKVALGLNLCMFVPRTLDDDSPPHTVASERLSDAALLSPVSWNTSSSRPSTPLSSFHGLKLSKSSSKSSKQTCSICLTKMKQGSGHAIFTAECSHSFHFHCIASNVKHGNQICPVCRAKWKEIPLSGPSLDPIPGRVSPSPINWPQNDALMAVVHRLPLPHPHRDLNRRHVVPLYQASEPGIFDDDESLNHQHVFTERSPCIENTEAARAMEIKTFPEVSAAPGSKTHSNFTVLVHLKAAAAAIDAAAVKRTNLSRNQANLAQISQTPRAPVDLVTVLDVSGSMAGTKLALLKRAMGFVIQNLGSNDRLSVIAFSSTARRLFPLCRMTDSGRQQALQAVNSLVANGGTNIAEGLRKGAKIMEDRKEKNPVASIILLSDGQDNYTVNGSGTNQPRPNYQFLLPSSISGGDNSGFQIPVHAFGFGADHDASLMHSISEISGGTFSFIETEAVLQDAFAQCIGGLLSVVVQELQVGIECIDPNLSLVSLKAGSYPSRVMADGRKGLIEVGDLYADEERDFLVSLNVPATSGNETSLIKVKCIYKDPLTQETSTMESKEVKIERTEIAGQVVMSLEVDRQRNRLQAAEAMAQARVAAEQGDLSGAILILENFRKMLSETVSAKSHDRLCVALDAELKEMQERMASRHVYEASGRAYILSGLSSHSWQRATARGDSTDRSSLVQAYQTPSMAEMLTRSQAMLLGSPSGQRLIQPLLSVRSQPSPR* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01822 727 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 131 IPR013083 -
Lapu7g01822 727 ProSiteProfiles VWFA domain profile. 280 466 IPR002035 -
Lapu7g01822 727 SUPERFAMILY vWA-like 275 466 IPR036465 -
Lapu7g01822 727 Gene3D von Willebrand factor, type A domain 280 467 IPR036465 -
Lapu7g01822 727 MobiDBLite consensus disorder prediction 48 71 - -
Lapu7g01822 727 SMART ring_2 80 123 IPR001841 -
Lapu7g01822 727 Pfam von Willebrand factor type A domain 280 463 IPR002035 -
Lapu7g01822 727 ProSiteProfiles Zinc finger RING-type profile. 80 124 IPR001841 -
Lapu7g01822 727 Coils Coil 625 645 - -
Lapu7g01822 727 SMART VWA_4 278 465 IPR002035 -
Lapu7g01822 727 CDD RING-H2_WAVH2 78 129 - -
Lapu7g01822 727 Pfam VWA / Hh protein intein-like 629 701 IPR032838 -
Lapu7g01822 727 CDD vWA_C3HC4_type 279 453 - -
Lapu7g01822 727 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 78 701 - -
Lapu7g01822 727 Pfam Ring finger domain 79 124 IPR001841 -
Lapu7g01822 727 SUPERFAMILY RING/U-box 76 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01822 Lapu-Chr7 34100433 34105447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01822 69 124 C3H Transcription Factor Family AT1G57730 41.071 9.14e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01822 - - gmx:100813569 1281.16