Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01820 ATGTTGAGTCAAGTGGCAAAAAAAGTTCTCAAAGTTGACATTAATCGTGAGTTACACCATTTTAGATTGTATGAAGACTTGCTTAAAATTGTTGATGGTGAGTATGTTTTTGCTTACATTGATGATCCTTGTAGGACAACTTACCCTCTCATGCAAAAGTTGAGATTAGTCCTAATTGATCATGCATTACAAAATGGTGACAAAGTGGCAAGTTCAAGTACCCCAATTTTCCAAAAGATAAGTGCTTTTGAGGAAGAGGTCAAAGTCCTTTTGCCCAAAGAGGTGGAAAGGGCTAGGATTGAATTTGAGAATGGAAATCCTGTTATTCCTAACCGAATTAAGGAATGCAGATCTTACTCATTATATCAGTTTGTGAGAGAAATCTTGGGTACAACTTTACTAACAGGTGAGAAAGTTAAGTCACCTGGTGAGGAATGTAATAAGATGTTGATGACCCTAATGAAAAGTTCCAAGGAAAACCATAGCAATGGCAACGGTTCATTGAGCCTCTGCAATGGTAGCAGCGACCCCCTTAACTGGGGCATGGCTGCGGAAGCTTTGAAAGGTAGCCACCTTGACGAGGTCAAGCGCATGGTGGAGGAGTACCGCAACCCCTTGGTGACGTTAGGTGGGAAGACTCTCACCGTATCTCAGGTGGCGGCGGTTGCCACCTGCCATGACGGCGGCGTGAAAGTGGAGCTGAAGGGGGAGAGCCGGCAGGGTGTGAAGGCGAGCAGTGATTGGGTGATTGACAGCATGGCGAAAGGCACTGATAGCTACGGGGTCACCACGGGGTTCGGTTCAACCTCACACAGGAGAACGAAGCAAGAGGCTTCTCATACATTACCCTATTCATCTACAAGGGCAGCTATGTTAGTTAGGATTAACACTTTGCTTCAAGGATATTCAGGCATTAGATTTGAAATTATGGAGGCTATTACCAAGTTTTTAAATCACAATATAACCCCATGTCTCCCACTACGTGGTACTATCACTGCATCAGGTGACTTGGTTCCTTTGTCATATGTTGCTGGCCTCTTAATTGGAAGACCAAACTCCAAGTCAATTGGACCTAATGGAGAAGTACTTAATGCTAAAGATGCCTTTAAATTAGCAGGAATTGATGGAGGTTTCTTTGAGTTGCAACCTAAAGAGGGTTTGGCACTAGTCAATGGCACTGCAGTTGGATCTGGCTTGGCTTCCATTGTTCTTTTTGAGGCAAACTTACTTGTTGTCCTCTCTGAAGTTTTGTCTGCAATTTTTGCTGAAGTTATGCAAGGAAAGCCAGAATTCACAGACCACTTGACTCATAAATTGAAGCACCACCCTGGCCAAATTGAGGCTGCAGCTATAATGGAGCACATATTAGATGGGAGCTCATATATTCAGGAAGCCCAAAAGTTACATGAGATTGATCCACTTCAAAAGCCAAAACAAGATAGGTATGCTCTTAGAACATCTCCTCAATGGCTTGGACCACAAATTGAAGTAATTAGACATGCAACAAAGATGATTGAAAGAGAGATAAACTCTGTAAATGATAACCCCTTGATCGATGTTTCAAGGAATAAGGCACTTCATGGGGGGAATTTCCAAGGTACTCCGATTGGTGTTTCAATGGATAACACTCGTTTGGCCATTGCATCAATTGGGAAACTTATGTTTGCCCAATTCTCTGAACTTGTGAACGACTTCTACAATAATGGTTTACCTTCAAATCTAACAGCTAGTCGCAATCCAAGCTTAGATTATGGATTCAAAGGTGCTGAAATAGCAATGGCATCCTATTGCTCAGAACTTCAATATCTGGCCAATCCTGTCACTAATCATGTCCAGAGTGCTGAGCAACATAACCAAGATGTCAATTCCTTAGGTTTGATTTCTTCAAGAAAGACAGCTGAAGCAATAGAAATATTAAAGCTCATGTCTTCCACTTTCTTAGTTGCACTGTGTCAAGCCATTGATTTGAGACATTTGGAAGAAAACATGAAGAACACCGTTAAAAATATTGTGAGTCAAGTGGCCAAAAGAGTTCTCACAACTGGCATCAATGGTGAGTTACATCCTTCTAGATTCTGTGAGAAGGACTTGCTTAAAATTGTTGATCATGAATATGTCTTTGCTTACATTGATGACCCCTGTAGTGTAACTTACCCTTTGATGCAAAAGTTGAGATCAGTTCTGGTTGATCATGCATTGCAAAATGGTGACAGAGAGGCAAATTCAAGCACCTCAATTTTCCAAAAGATAAGTGCCTTTGAGGAAGAGCTCAAAGCCCTTTTGCCCAAGGAGGTAGAAAGTGCTAGGATTGAAGTTGAGAATGGAAATTCAACAATTCCTAACAGAATTAAAGAGTGCAGGTCTTACCCATTATATAAGTTTGTGAGAGAAAACTTGGGTACAACTTTGCTAACAGGTGAGAAGGTGAAGTCACCTGGTGAGGAATGTGACAAGGTTTTTACTGCATTATGTGAAGGGAAGTTTATTGATCCTATGTTGGATTGTCTAAAGAACTGGAATGGTTCTCCTCTACCAATATGCTAA 2544 0.4143 MLSQVAKKVLKVDINRELHHFRLYEDLLKIVDGEYVFAYIDDPCRTTYPLMQKLRLVLIDHALQNGDKVASSSTPIFQKISAFEEEVKVLLPKEVERARIEFENGNPVIPNRIKECRSYSLYQFVREILGTTLLTGEKVKSPGEECNKMLMTLMKSSKENHSNGNGSLSLCNGSSDPLNWGMAAEALKGSHLDEVKRMVEEYRNPLVTLGGKTLTVSQVAAVATCHDGGVKVELKGESRQGVKASSDWVIDSMAKGTDSYGVTTGFGSTSHRRTKQEASHTLPYSSTRAAMLVRINTLLQGYSGIRFEIMEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGEVLNAKDAFKLAGIDGGFFELQPKEGLALVNGTAVGSGLASIVLFEANLLVVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIQEAQKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIEILKLMSSTFLVALCQAIDLRHLEENMKNTVKNIVSQVAKRVLTTGINGELHPSRFCEKDLLKIVDHEYVFAYIDDPCSVTYPLMQKLRSVLVDHALQNGDREANSSTSIFQKISAFEEELKALLPKEVESARIEVENGNSTIPNRIKECRSYPLYKFVRENLGTTLLTGEKVKSPGEECDKVFTALCEGKFIDPMLDCLKNWNGSPLPIC* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01820 847 PANTHER HISTIDINE AMMONIA-LYASE 2 154 IPR001106 -
Lapu7g01820 847 NCBIfam phenylalanine ammonia-lyase 277 837 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lapu7g01820 847 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 329 345 IPR022313 GO:0016841
Lapu7g01820 847 Pfam Aromatic amino acid lyase 214 672 IPR001106 -
Lapu7g01820 847 FunFam Phenylalanine ammonia-lyase 394 710 - -
Lapu7g01820 847 Gene3D Fumarase/aspartase (Central domain) 394 841 - -
Lapu7g01820 847 Gene3D - 660 781 IPR023144 -
Lapu7g01820 847 Gene3D - 1 109 IPR023144 -
Lapu7g01820 847 SUPERFAMILY L-aspartase-like 2 154 IPR008948 GO:0003824
Lapu7g01820 847 FunFam Phenylalanine ammonia-lyase 660 781 - -
Lapu7g01820 847 Gene3D - 169 393 IPR024083 -
Lapu7g01820 847 CDD PAL-HAL 212 657 IPR001106 -
Lapu7g01820 847 Gene3D Fumarase/aspartase (Central domain) 110 168 - -
Lapu7g01820 847 SUPERFAMILY L-aspartase-like 176 847 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01820 Lapu-Chr7 34056773 34071922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01820 154 847 Monolignol Biosynthesis Gene Families AT2G37040 77.410 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01820 K10775 - gmx:100801470 1252.65