Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01819 ATGGGTGGTGTTGAAATCCCCAATTGGCTGAAAGGGTTGCCGGTGGCTCCGGAATTTCGCCCTACAGACACTGAATTTGCTGACCCAATTGCTTACATTTCAAAGATCGAGAAGGAAGCTGCCGGCTTTGGGATTTGTAAGATTATCCCACCATTGCCCAAACCTTCAAAAAAATATGTCTTTTCTAATTTGAATAGGTCCCTCTTGAAGTGCCCGGATTTGGGTCCAGATAACAGTTCATCTGGTGTTTGTAATTCATTAAAAACCGGTTCTGGGGACGGTAGTAGTGATGGGGTGTCTCGAGCCGTGTTTACTACAAGGCATCAAGAACTAGGGCAGAGTCAGAGTGTGAAAAAGGCCAAAGGGACAGTTCAGAATCCACTGTCAGGTGTTCATAAGCAAGTATGGCAAAGTGGGGAGGTTTATACTCTGGAACAGTTTGAGACTAAATCGAAGTCTTTTGCGAGAAGCTTGCTAGGGTCGGTGAAGGATGTTTCTCCTCTGGTTATAGAGTCTATGTTTTGGAAGGCAACTTTAGAGAAGCCAATATATGTGGAGTATGCCAATGACGTGCCTGGGTCTGCTTTTGAAGAGTCAAAGGGTCAATTTCATTATAGTCACAGAAGGCTAAGAAAAAGGACTTATTATAAGAGTAGGCTAGATAGCTCGGACTGTAAGCAAACTGAAATGCGTTGCGGAAGAGATACCCAAACTGATGAGAGTAAGGGTGCTTCTGTCCGAAGTGATGCCGACACATGTTTACGGATGGCCAAATCAGTTGCTACTGTGTCAACATTTTCATCAAATGAAGATTCACAATCTTTTAAGGAAAAGAGTTCAGATACTGGCAATGATATGCTAGGCTCTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACCTGCAAGTTATTGCACGATCATCTGGCTCACTGACACGTTTTATGCCGGATGATATTCCTGGTGTCACTTCACCTATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAGCTTCACAGCTTGAATTTTCTTCACACTGGCTCATCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTTTGCTTTTGAGGAAGTGATCCGTACCGAGGGTTACGGTGGTAATATTGATCACTTAGCCGCTTTGAAACTTTTGGGTGAAAAAACAACTCTTTTGTCACCTGAGGTTATTGTTGCATCTGGAATTCCTTGTTGCAGGTTAACACAGAACCCTGGCGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTAGAGTAGCCAAGGAAGCTGCAGTGCGCAGAGCTGCAATGAACTATCTTCCCATGCTTTCCCATCAGCAACTGCTTTACTTATTGACTATGTCTTTTATTTCAAGAGTTCCAAGAACACTATTACCTGGTGTGCGTAGTTCTCGTTTGAGAGACCGTCAGAAAGAAGAAAGGGAGTTTTTAGTAAAACAGGCTTTCATAGATGACATGCTACAGGAAAACAAGCTTCTATCGATTCTTCTTGGAAAGGAAGTTGCTAAAAGAGCTGTTTTATGGAATGCTGGTTTGCTGCCAGATTCCAGCAAAGATTTTCAGTTGCCTGATTTAACTTCTACAACTGGAACCTCTGTGGCAAACATGTCAAATATTAGTTCTGCAGAAAAGAGTGGTCATTATCTTCTTGATGATGAGATGAGTTTGTACATGGATTGTTTGACCAATATAGATATTGGTGGTGATGATCTTCCTTCTCACTTCCAAACTGATTCCGGCGCATTGGCTTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTTATGGCTGTGATACAACCAACTGAGAAATTGACAATGGAACTTCTTCCTGATAATTATCTAATTCAAGTTTCCTCACCGGACTCTACTGCTTGTCTTCGCAGTTCCATATCAAGAGATCTTTCTGTTTCTGAACTTTCATCAGTAAAGGAGATGCCAGATCAATCATTAAATAATTGCAGTAAATCTTGGAACACCTCCAGTAAATTTTTTAGGCCTCGGATATTTTGCCTGGGGCATGCTGTTCAAATAGTAGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTGTAATTTGCCATTCAGACTATGAGAAAATAAAGGCACATGCCAGGGAAGTTGCGGAAGAGATACATGGTGCTTTTGATTATAATGAGGTTCCATTAGATACTGCATCCCCAGAAAATTTGACCCTGATAGATCTGGCGGTTGATGGTGAAGAGCTTGATGAATGTGAAGACTGGACATCAACTCTAGGCATTAACCTACGGAATTGGGTCCTTGCTAGAAATAATGCTCCATCTAAACAAGTTCCTTGGACACTAGGGACATTGTTCTATGATAAATGTCCTGCTTCAAATGTTTTAGCTTTAAATTGGCAGTCTCGGAGATCTCGGTCGAAAAGGTCAAGTCATTTAGTTCAGACTAAATCCTCTCACAGCATTGAGAGAAAGAAGGATGATCAGTTGGGTGGAGGAATAAATGACTCCACTGCTGAAAAGAAGCTAATTCAATATTCAAGAAGGAAGTTCAAGTCAAAGCAAAGGTGTTTCCCTGTAGCAAACATGGTCTGTGAATTCCAAGAGAAGCCCAAAAATGTTTCAACTACTTTAAGCGATAATAATAATTGTGTTTCTAAAACTCTTGAAGCTGAGAATTTCAGGACTGAGTGTGCATTGCCATGTGCCTCTGCTTCTACTGAAATGTCTGCAATGCATCCTGAAATCCAGATTGCTGAAATACCCATTGGCACGAAAATGAATGCTGCTAAGTCACAACCTTCAAATTCCATTCCTGATCATATTTTAATGATTGAAAAAGTTGGAGAAGAGATTGAGAATCCAACCATGCAGGAATCAGATGTAGACACAAATATTGATTTGACATTCAGTCATTCTAAGATGCACTGCGATACCAGTGTCTCAGAAATATGTGGCAAGGAGAGCCAAGATTGTCTGGACAAGAAATGTTGTAGCGCTCTTTCAAATGTAACAGATGGAAATATTGAAATGATTAGAAAGACTGAAATTGCAAAAGCAGTTATCATTGATAGCAAGTATAATAGGTTAACATTGGATGATGAAGGGCATCAAGAATATCAGTCTACGTACAAAAGCAACAATGAGGAAGCTGCTTTATCACCTGCTTCAATGGTAAATCAATCTACACTTGCATCTATGAATGGAAATGTTGAAAGTCCAAATAATATTTGTATAGCTGAAAGAATTAGGAATCCTATTTTCCTAGAAAAGACAAATGGGGAAGAAATGGATTCTGTAAGTGAAAGGGACAAGGAACCTCGAGTTGATGACGGACCATTTAGTGAACATACTCCAAATGAAGTTTGTGAAGTTCGAAGAGAGCTTTATGCTTCTGCAGATTTGCATAATAACGGAATCATGGATGGTGAGATGCTACAGGAAACTCAGGGTGGAAAAAATAGCAAAAGGGAAATAAGTCAGTCCACTCATGTTCCAGCAAAAGAATGGTATCCATCGTCTGTGCAGTGTCAGATTGAAAATATGAATAAAATTAATGAGGAACCTGTTTCTAGTTATGCTGCGAAAGGTGAAAATAAAAGCGTAACTTCATTAGAATTAGGATGTTGTGAAGTTTCAGTCGAAACCTGTCCTAACAAAGACTCCTGTATTCAATTTATTCCAGATAAAGAAATAGAAATGGAAATCCAGTCAGTTAATAGAATTGATGAGGAATTTTCCTCTGGCACTGATACATGGATAAAGGACTGTTCTCTATCAATGCAGGAATGCTCAGAAATTGAGAAAGAGATTTATGTTACAGAAAATATAAATGAAATCAAAGCTGATTTGTCTCAAGATAAAAGGGGGCTGGAAAGCTGTGAGTTGGCTACAGAAGTTCCCAGATTAAATGCTGGGAAGAAAAAAAAGAGGAAAGTGGAACGAACAAGAAGGAACAAATCCAATTCTGAAAACTTTATTAGAAGTCCATGTGAGGGGCTGAGGCCAAGAGCTGGGAAGATTGCCCCTGGAAAAAGTAGAGTGGAAATCAACCAAGTTGACAAGGAAAATCAGGTGGCTAAACGGGCAAGGAGATCTTCTGAAGTTTTGGTTCCTCGCAAAAATAAAAAAGATGGTGTTAAAAAGTCCCACAAGTGCGACCTCGATGGTTGCCGAATGAGTTTCAAGACTAAGGCAGAGTTACTGTTGCATAAACGAAACCTTTGCCCACATGAAGGGTGTGGTAAGAAGTTCAGTTCCCACAAATATGCTTTACTTCACCAGCGTGTTCATGATGATGAGAGGCCCCTTAAGTGCCCATGGAAAGGTTGTTCCATGTCGTTCAAGTGGGCTTGGGCAAGGACAGAGCACATACGCGTACATACTGGGGAGAAGCCTTATCACTGCAAGGTGGAGGGATGCGGCCTTTCCTTCAGGTTTGTATCAGATTTTAGTAGACACAGACGGAAAACGGGACACCACGTGAAACCTCCTGCTTGA 4581 0.4095 MGGVEIPNWLKGLPVAPEFRPTDTEFADPIAYISKIEKEAAGFGICKIIPPLPKPSKKYVFSNLNRSLLKCPDLGPDNSSSGVCNSLKTGSGDGSSDGVSRAVFTTRHQELGQSQSVKKAKGTVQNPLSGVHKQVWQSGEVYTLEQFETKSKSFARSLLGSVKDVSPLVIESMFWKATLEKPIYVEYANDVPGSAFEESKGQFHYSHRRLRKRTYYKSRLDSSDCKQTEMRCGRDTQTDESKGASVRSDADTCLRMAKSVATVSTFSSNEDSQSFKEKSSDTGNDMLGSAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSSKTWYAVPGDYAFAFEEVIRTEGYGGNIDHLAALKLLGEKTTLLSPEVIVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLRVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFLVKQAFIDDMLQENKLLSILLGKEVAKRAVLWNAGLLPDSSKDFQLPDLTSTTGTSVANMSNISSAEKSGHYLLDDEMSLYMDCLTNIDIGGDDLPSHFQTDSGALACVGCGILGFPFMAVIQPTEKLTMELLPDNYLIQVSSPDSTACLRSSISRDLSVSELSSVKEMPDQSLNNCSKSWNTSSKFFRPRIFCLGHAVQIVEMLQSKGGANVLVICHSDYEKIKAHAREVAEEIHGAFDYNEVPLDTASPENLTLIDLAVDGEELDECEDWTSTLGINLRNWVLARNNAPSKQVPWTLGTLFYDKCPASNVLALNWQSRRSRSKRSSHLVQTKSSHSIERKKDDQLGGGINDSTAEKKLIQYSRRKFKSKQRCFPVANMVCEFQEKPKNVSTTLSDNNNCVSKTLEAENFRTECALPCASASTEMSAMHPEIQIAEIPIGTKMNAAKSQPSNSIPDHILMIEKVGEEIENPTMQESDVDTNIDLTFSHSKMHCDTSVSEICGKESQDCLDKKCCSALSNVTDGNIEMIRKTEIAKAVIIDSKYNRLTLDDEGHQEYQSTYKSNNEEAALSPASMVNQSTLASMNGNVESPNNICIAERIRNPIFLEKTNGEEMDSVSERDKEPRVDDGPFSEHTPNEVCEVRRELYASADLHNNGIMDGEMLQETQGGKNSKREISQSTHVPAKEWYPSSVQCQIENMNKINEEPVSSYAAKGENKSVTSLELGCCEVSVETCPNKDSCIQFIPDKEIEMEIQSVNRIDEEFSSGTDTWIKDCSLSMQECSEIEKEIYVTENINEIKADLSQDKRGLESCELATEVPRLNAGKKKKRKVERTRRNKSNSENFIRSPCEGLRPRAGKIAPGKSRVEINQVDKENQVAKRARRSSEVLVPRKNKKDGVKKSHKCDLDGCRMSFKTKAELLLHKRNLCPHEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHHVKPPA* 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01819 1526 Pfam JmjC domain, hydroxylase 326 445 IPR003347 -
Lapu7g01819 1526 Pfam jmjN domain 17 50 IPR003349 -
Lapu7g01819 1526 FunFam Probable lysine-specific demethylase ELF6 1461 1490 - -
Lapu7g01819 1526 ProSitePatterns Zinc finger C2H2 type domain signature. 1496 1520 IPR013087 -
Lapu7g01819 1526 ProSitePatterns Zinc finger C2H2 type domain signature. 1466 1488 IPR013087 -
Lapu7g01819 1526 SMART c2h2final6 1411 1433 IPR013087 -
Lapu7g01819 1526 SMART c2h2final6 1494 1520 IPR013087 -
Lapu7g01819 1526 SMART c2h2final6 1434 1458 IPR013087 -
Lapu7g01819 1526 SMART c2h2final6 1464 1488 IPR013087 -
Lapu7g01819 1526 ProSiteProfiles Zinc finger C2H2 type domain profile. 1464 1493 IPR013087 -
Lapu7g01819 1526 SMART JmjN_1 15 55 IPR003349 -
Lapu7g01819 1526 SUPERFAMILY Clavaminate synthase-like 294 459 - -
Lapu7g01819 1526 SUPERFAMILY beta-beta-alpha zinc fingers 1435 1471 IPR036236 -
Lapu7g01819 1526 Gene3D Classic Zinc Finger 1432 1520 - -
Lapu7g01819 1526 Gene3D Cupin 9 466 - -
Lapu7g01819 1526 MobiDBLite consensus disorder prediction 835 861 - -
Lapu7g01819 1526 ProSiteProfiles Zinc finger C2H2 type domain profile. 1494 1525 IPR013087 -
Lapu7g01819 1526 MobiDBLite consensus disorder prediction 1118 1145 - -
Lapu7g01819 1526 SUPERFAMILY beta-beta-alpha zinc fingers 1474 1524 IPR036236 -
Lapu7g01819 1526 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Lapu7g01819 1526 ProSiteProfiles Zinc finger C2H2 type domain profile. 1434 1463 IPR013087 -
Lapu7g01819 1526 ProSitePatterns Zinc finger C2H2 type domain signature. 1436 1458 IPR013087 -
Lapu7g01819 1526 ProSiteProfiles JmjC domain profile. 293 462 IPR003347 -
Lapu7g01819 1526 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1460 - -
Lapu7g01819 1526 MobiDBLite consensus disorder prediction 1334 1356 - -
Lapu7g01819 1526 SMART cupin_9 293 462 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01819 Lapu-Chr7 34030652 34043160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01819 1 877 C2H2 Transcription Factor Family AT5G04240 55.246 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g01819 JmjC 8.2e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01819 - - gmx:100799861 2518.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01819 7 34030652 34043160 Lapu7g01819 7 34030652 34043160 ECH