Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01796 ATGGGAAGAAAGGCCAATTGTGAGAATCAATATGCTATGAACAGAGGTCCTTGGTCTGCTGAAGAAGACAAAACTCTTATGAACTACGTTCAAGTCCACGGAGAAGGTAGATGGAGAGAGCTTTCCAAAAGAGCAGGGTTGAAAAGATGTGGCAAAAGTTGTAGACTTCGATGGCTGAATTATCTAAAGCCAGATATTAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATCAGATTACACAAACTCTTAGGAAACAGATGGTCTCTAATTGCGGGACGGTTACCAGGGAGAACAGACAATGAAATTAAGAACTATTGGAATACTTATTTGAGAAAGAAAATAGAGCAAAAGCACAATCAAAACGATGTTGTTGGCCATGACAGCAACATTCCTATAAAGTTAAGCTCCAAAAGTTCACTGGGTGATGTTCTTGATCCTACAAAATCTTCTCACCCAATGATGATTAAACCAAAATCAATGAGGTGTAGCAAGGTTATGATGCCAGGCAATGATTCAGTCAACACAATGAATTTGATCACAACCAGCTGGGACCATAACCCTTCTGCATCCATGCCACAAGATGACCATAACCATTGTTTAACAGGTGTTCTTCAAGACTTTGACATCAGTGACTTGTTAGCGTCATACGAGGAGGATTGTCGTTTCAATGGATATGCTTGTGTTGAAATACCCGAACATATTTTTGAAGATGAGACTTGGAGGCTTCATGATTCGATGGTTGAAGAAACTTGGTACGAGAATTGGAAGCATGAGACCTACTTTGCACACGAACAAGATACGGATATGGGCTTTTCTTCATTTTAA 834 0.3957 MGRKANCENQYAMNRGPWSAEEDKTLMNYVQVHGEGRWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKIEQKHNQNDVVGHDSNIPIKLSSKSSLGDVLDPTKSSHPMMIKPKSMRCSKVMMPGNDSVNTMNLITTSWDHNPSASMPQDDHNHCLTGVLQDFDISDLLASYEEDCRFNGYACVEIPEHIFEDETWRLHDSMVEETWYENWKHETYFAHEQDTDMGFSSF* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01796 277 SMART sant 14 64 IPR001005 -
Lapu7g01796 277 SMART sant 67 115 IPR001005 -
Lapu7g01796 277 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Lapu7g01796 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 62 IPR017930 -
Lapu7g01796 277 FunFam MYB-related transcription factor 14 67 - -
Lapu7g01796 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lapu7g01796 277 FunFam Transcription factor TT2 71 139 - -
Lapu7g01796 277 CDD SANT 72 113 IPR001005 -
Lapu7g01796 277 Gene3D - 72 133 - -
Lapu7g01796 277 Gene3D - 15 67 - -
Lapu7g01796 277 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lapu7g01796 277 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 172 - -
Lapu7g01796 277 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lapu7g01796 277 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lapu7g01796 277 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lapu7g01796 277 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01796 Lapu-Chr7 33739129 33740145 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01796 7 117 MYB Transcription Factor Family AT3G13540 72.072 3.46e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu7g01796 Myb_DNA-binding 9.6e-16 CL0123