Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01795 ATGAAAAGAAAGGGAGGTTATGAGAACCAAGATGCTGTGAACAGAGGTGCTTGGTCCGCTGAGGAAGATCAAATCCTTATTGACTACGTTCACCTCAATGGAGAAGGAAAATGGGGGCAGATTTCCAGAAGAACTGGTTTAAAACGAGGTGGGAAGAGTTGCAGACTTCGATGGTTGAACTATCTAAAGCCAGATATCAAGAGAGGAAATATTTCTTCAGATGAAGAGGATCTCATTATCAGGCTACATGGCCTCCTAGGGAATAGAATTGAATCTCCACGGTGCTCAAAAAATTCTTTGGGAATTGCTATTGATCCTGCCAAATCTTCTCAAGCAGTGAGGTGTTCTGAGGTTATGATGCCAACTCGAGCACTCAATGATTCAGTCAACACAAAGGGTTTAATGTCAACAAGTTGGAATGAAAACCCACTTGCATCAATCCCACCAGACGACCATCATGGCTGCCCAGAAGGTTTCCTCAAACACTTTGATATAAGTGACTTGTTGATGCCCCACGACGAGGATTGTCATTTTAATGGCCATGCTTGTGTTGAAATACCCCAACATTTTGGAGATGAATCCTGCAGGGTTAATGATGCAATGTGTGAAACATGGTATGATAATTGGAAGAATGACGACTATTTTCCACTAGAATATGACGTGGATTTTTCTTTATTTCAATAG 684 0.4152 MKRKGGYENQDAVNRGAWSAEEDQILIDYVHLNGEGKWGQISRRTGLKRGGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHGLLGNRIESPRCSKNSLGIAIDPAKSSQAVRCSEVMMPTRALNDSVNTKGLMSTSWNENPLASIPPDDHHGCPEGFLKHFDISDLLMPHDEDCHFNGHACVEIPQHFGDESCRVNDAMCETWYDNWKNDDYFPLEYDVDFSLFQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01795 227 Gene3D - 7 68 - -
Lapu7g01795 227 SMART sant 14 64 IPR001005 -
Lapu7g01795 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Lapu7g01795 227 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lapu7g01795 227 SUPERFAMILY Homeodomain-like 16 89 IPR009057 -
Lapu7g01795 227 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 10 89 - -
Lapu7g01795 227 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lapu7g01795 227 FunFam Myb transcription factor 15 67 - -
Lapu7g01795 227 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01795 Lapu-Chr7 33718141 33719245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01795 8 89 MYB Transcription Factor Family AT5G52600 65.854 6.67e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu7g01795 Myb_DNA-binding 6.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01795 K09422 - gmx:547459 311.227