Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01794 ATGACTGAAGAAAGTGCTGGAAACACAGTAGCAACCTCTATCACCCCATTAAACTGGTGGTATCTCCAGGCAAATTCCATTTCTTCCTGGAACGATACTAATAACACATGGAACAACCAACCAAACCCTAATTCTTCCTCTTCTTGTGAGGAGGATATATCTGTTTCTACATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACTGTTGAGTCCTCTCGCAGACTCATTGAGCCACCTGTTCCTTCCTCCAACGAGTTGATGGGAGAACATGCTTCAGATAATCAACTTTGGAGCCATGTTCTATCAGGTGTTGGATCAAACGGCGAGTTACACAACAGCCAAGAAATTGGAGAGAACTTTCTGGATGCACTGTCATCAAAAAGCATGACAAGCACTATGTTTCAACCAGTTTGTGACTACTTGAAGAAACTTGATCATACCAGTTGGGAATATAGTGGTTCAACTTCATTAAATACCTTTGAGAAGCATTTAAATGGGTTTAGTGAGGCGATGATTGAGAATAATGAAAGGTTGACCAAGTTATCAAATCTTGTAAGCACTTGGTCTATTGCTCCACCAGACCCAGAAGTAAGTAGCCACTTTGATTCACAAACCAACAACATGTCCCTGAATTCTTCCATGGATAATTTCCCACAACCTGATCACTTCAAGCAACCTTTTGGAGACTCCACATGCTCTATTGGAGGAGGAGCAAATAGAAATTCTGGAGTGTTCCCATGTTATGATCATGACATGAAGATCAAGCAAGAGTTTCATGCAAGCGAAGTGCAACGATCTGTATATGGAAAATCATTAAATGTAAATGGATATCAGAATGGATTTAATGGCCTTGCAGTGGCTGATAGTTGCAAGCTCTACCATGGGATGCCCAATCTTCCTTCATGCACAAGAACTTTCTCAGATGTTATATCCTTTAATAGTCGACTAGCAAGGCCAGTTATTGGAATCCATGCTCAGAAGCCTAGCATGAAGTACCTGAACGTATCCGAACCAAAGAAGCAGGGTCTTCAAGCACCATCACCGATAAGAACTAACATTAATGGAAAAGGGGAGGGGACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCTTCAGATGCAATGTTAAAAAAGCCTAAGCAAGATACATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACTGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTTTCTTCAAGAACAAGTCCAGCTACTGAGCAACCCTTACTTGAAGGCTAACTCTCACAAGGATCCATGGGGAAGCTTGGATAGAAAAGATAAGGACGATACAAAGCTAGATCTTCGGAGCAGAGGTCTTTGTTTAGTTCCTACTTCATGCACTCCTTTAGTTTACAGAGAGAGCAGCGGACCAGATTACTGGACACCAGCTTACAGAGGATGTTTGTATAGGTGA 1518 0.4177 MTEESAGNTVATSITPLNWWYLQANSISSWNDTNNTWNNQPNPNSSSSCEEDISVSTSFTNASNHSSLTVESSRRLIEPPVPSSNELMGEHASDNQLWSHVLSGVGSNGELHNSQEIGENFLDALSSKSMTSTMFQPVCDYLKKLDHTSWEYSGSTSLNTFEKHLNGFSEAMIENNERLTKLSNLVSTWSIAPPDPEVSSHFDSQTNNMSLNSSMDNFPQPDHFKQPFGDSTCSIGGGANRNSGVFPCYDHDMKIKQEFHASEVQRSVYGKSLNVNGYQNGFNGLAVADSCKLYHGMPNLPSCTRTFSDVISFNSRLARPVIGIHAQKPSMKYLNVSEPKKQGLQAPSPIRTNINGKGEGTTREVKKKRSEESSDAMLKKPKQDTSTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKANSHKDPWGSLDRKDKDDTKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01794 505 Gene3D - 396 452 IPR036638 GO:0046983
Lapu7g01794 505 MobiDBLite consensus disorder prediction 33 53 - -
Lapu7g01794 505 CDD bHLH_AtbHLH_like 399 441 IPR045239 -
Lapu7g01794 505 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 107 483 - -
Lapu7g01794 505 MobiDBLite consensus disorder prediction 360 379 - -
Lapu7g01794 505 MobiDBLite consensus disorder prediction 380 394 - -
Lapu7g01794 505 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 399 449 IPR036638 GO:0046983
Lapu7g01794 505 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 384 433 IPR011598 GO:0046983
Lapu7g01794 505 MobiDBLite consensus disorder prediction 338 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01794 Lapu-Chr7 33697863 33701154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01794 23 505 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 34.331 5.02e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01794 - - gmx:100527800 867.84