Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01791 ATGATGCCCCCTGAGCAAGAAACCACTATTGCACCAAACATTCCACCCATATCAACCCGACCAGAGACCAGCTCGGTGCATCATGAACCAGAAGGTTCTACCACTAACAAAATCAAACCAAGTCTGGAATTGGATGATAATGGCATTCCCACCCAGCATCAGACTCTGCCAACTCCATCTCCCCCACCAAGATTATCCGTTCTTCACCAATCCTTGCGCCCCATTACCCTCAAATTCGAAGACGTGTCTTACACTATAACCTTCGAAAGCCAGAAGAAGAAGGGTTGCGTTTTACGTAATGAGTCCAAGCTAAGAAGAAAGGTTCTGAGCGGCGTGAGCGGAGTAGCGAATTCCGGCGAGTTAACGGCAATGCTGGGTCCGTCCGGGAGCGGGAAGACGACCCTCTTAACCGCCCTGGCGGGGAGGCTGGCCGGAAAAGTGTCCGGCAGGATAACGTACAACGGACACAGCGACAGCTCATTCGTGAAACGAAAGGTTGGGTTCGTACCCCAAGACGACGTTCTCTACCCTCACCTCACAGTGTTGGAAACTCTCACTTACGCAGCTCTGTTGAGGCTACCCAAGAGTTTGAGCAGAGAAGAGAAGAAGGAGCACGCGGAGATGGTGATCGCGGAGCTTGGCCTCACACGGTGTCGTAATAGCCCCGTTGGAGGATGCATGGCTATGTTCCGGGGCATTTCGGGTGGGGAACGGAAACGGGTCAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTATTGTTCGTCGATGAGCCAACTTCGGGTTTGGACTCCACCACGGCCCAACTTATCGTGTCGGTGCTCCGCGGGCTCGCCCGGGCTGGTCGGACCGTCGTCACCACCATCCACCAGCCTTCCAGCCGGTTGTATAGGATGTTTGATAAGGTGGTGGTCTTGTCCGACGGGTACCCCATTTATAGCGGGCAGGCGAGTCGGGTCATGGACTATCTTGGATCCGTTGGGTATGTCCCGGCTTTCAATTTCATGAACCCGGCAGATTTCCTCCTTGATCTTGCTAACGGCATAGTTGCTGATGTCAAACATGATCAGATAGACCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTTTAAGAAGAACTTATATCCTGCTCTTAAAGAAGACATTCAACAAAATAACAGTGACCCTCTGGCTTTTACATCAGGAACAACTAGACGCTCTGATAACCAATGGACTACCAGCTGGTGGGAGCAATTCAGGGTGCTTCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGTTTAAGGATTTTCCAAGTCCTGTCTGTATCCATTCTCTCAGGTCTCCTGTGGTGGCACTCTGATCCTGCACATGTACAAGATCAGGTGGGACTCCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTCAACGCCATCTTTGCATTTCCTCTGGAGAGGCCAATGCTAATAAAGGAAAGATCTTCAGGGATGTACCAACTCTCCTCGTACTATGTTGCCAGGATGGTGGGGGACTTACCAATGGAGCTAGTGCTTCCTACCATATTTGTAACTATTTCCTACTGGATGGGTGGTCTCAAGCCTTCATTGGTCACGTTTGTGTTAACCCTCTTGATCATGCTTTTTAATGTGCTAGTCTCTCAAGGCATAGGCCTAGCACTTGGGGCCATCCTCATGGATGTGAAGCAGGCCACAACTCTAGCTTCAGTGACCATGCTGGTGTTTCTCTTGGCCGGTGGTTACTACATTCAGCAAATGCCTGCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTACTGGTAGCAGTCCAGTATCCAATAAATGAGGTATATGAGTGTGGACCAGGGTTACATTGTAGAGTGAGAGATTTCCCTGCCATAAAGTGTCTGGAGCTTGATCATAACATGTGGGGTGAAGTGGCTGCATTGACTGTAATGTTGATTGGATACAGAATTGTGGCATATCTAGCCTTGAGGATGGGACAACCTCACTGA 2043 0.4944 MMPPEQETTIAPNIPPISTRPETSSVHHEPEGSTTNKIKPSLELDDNGIPTQHQTLPTPSPPPRLSVLHQSLRPITLKFEDVSYTITFESQKKKGCVLRNESKLRRKVLSGVSGVANSGELTAMLGPSGSGKTTLLTALAGRLAGKVSGRITYNGHSDSSFVKRKVGFVPQDDVLYPHLTVLETLTYAALLRLPKSLSREEKKEHAEMVIAELGLTRCRNSPVGGCMAMFRGISGGERKRVSIGQEMLVNPSLLFVDEPTSGLDSTTAQLIVSVLRGLARAGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGQASRVMDYLGSVGYVPAFNFMNPADFLLDLANGIVADVKHDQIDHHEDQASVKQSLISSFKKNLYPALKEDIQQNNSDPLAFTSGTTRRSDNQWTTSWWEQFRVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPAHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYQLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVAVQYPINEVYECGPGLHCRVRDFPAIKCLELDHNMWGEVAALTVMLIGYRIVAYLALRMGQPH* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01791 680 Gene3D - 92 327 IPR027417 -
Lapu7g01791 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 671 - -
Lapu7g01791 680 FunFam ABC transporter G family member 22 96 327 - -
Lapu7g01791 680 ProSitePatterns ABC transporters family signature. 233 247 IPR017871 GO:0005524|GO:0016887
Lapu7g01791 680 MobiDBLite consensus disorder prediction 1 64 - -
Lapu7g01791 680 Pfam ABC-2 type transporter 415 621 IPR013525 GO:0016020|GO:0140359
Lapu7g01791 680 CDD ABCG_EPDR 74 315 - -
Lapu7g01791 680 Pfam ABC-2 type transporter 290 359 IPR043926 GO:0140359
Lapu7g01791 680 SMART AAA_5 118 311 IPR003593 GO:0016887
Lapu7g01791 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 326 IPR027417 -
Lapu7g01791 680 Pfam ABC transporter 110 261 IPR003439 GO:0005524
Lapu7g01791 680 MobiDBLite consensus disorder prediction 11 54 - -
Lapu7g01791 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 333 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01791 Lapu-Chr7 33631171 33635875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01791 116 321 Calmodulin-binding Proteins AT2G36910 25.000 1.43e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01791 K05681 - gmx:100783696 1219.14