Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01777 ATGTATTTCTTCACTGAGAAAATGCAGCGGTTGAAGATGGGGTTCCCTGACTACATCCAGGCATTGGAAGAAGAACGCCGTAAGATTCAGGTGTTCTGCAAAGAGCTTCCTCTTTCCTTGGAACTGGTTAGTCAAGCCATTGAAGCTTGCAAACAGCAATTGTCTGGCACCACGAGCGAGTATAATTTGAATGGTCAATCGGAGTGTTCGGAGCGGACAACATCATCGGAGGGACCAGTTTTTGAGGAATTCATTCCAATCAAGAAAAGGGCATCATCATCACCTTGTTGCGATGAAGATGATGAAGACGATGAACAGCATTCTCTCAAGCAAAGCGTTTCAAATGAGAATAATAAGAACAGTGATAAGGGGAAATCCGACTGGCTTAGATCTGTTCAGTTGTGGAATCCAGATCCCCCAACTGAGGAGGACGTGACAAGGAAAGTGCCTGGGATAGAATTGAAGAGAAGTGGAAGTGGTGGTGGTGCTTTCCAGCCATTCCACAAGGAAGAAAGAGCTGCAAAGGCAACTGAATCATTGTGTAAAGCACCCTCTTCAACCCGGGTAGCTGCTGCGAGTTCTAGCGCCGGAGAACTCACCCCAGAAAAAAATCTGAATGAGGGACAGAGAAAGCAGCGCAGGTGCTGGTCTCAGGACTTGCATAAGCGCTTCTTGCATGCCCTTCAGCAGCTAGGGGGTGCAGATTCTGCCACACCAAAACAAATCAGAGAGCTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGTTTGCACACTAGAAGGCCAAGCCCCTTGGTTCACAACAGTTCCAGTCCACAGGCAGCGCCATTTGTTCTTGTAGGGAACATTTTTGTTCAGTCACCAGAATATGCAGCTGTAGCTACCTCAACAGCATCAAGAGAAATGACCACAGTTGCAGCACCTGCTGGAATTTATGCACCAGTGGCCACGCATCCTACTCCCGTTTCACAACCATCAGCTGATTCAATTAAGAAGCCACAATTAAAGAAATTTAAGCATTTTGAACATTCAAATTCAGATGAAAGGGCGCATCACAGTGAAGGAGCTGTTCATTCAAATTCCCCTACCTCATCCTCCTCTACACACACTTCTACTTCCCCTGGTTATTAA 1155 0.4597 MYFFTEKMQRLKMGFPDYIQALEEERRKIQVFCKELPLSLELVSQAIEACKQQLSGTTSEYNLNGQSECSERTTSSEGPVFEEFIPIKKRASSSPCCDEDDEDDEQHSLKQSVSNENNKNSDKGKSDWLRSVQLWNPDPPTEEDVTRKVPGIELKRSGSGGGAFQPFHKEERAAKATESLCKAPSSTRVAAASSSAGELTPEKNLNEGQRKQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPLVHNSSSPQAAPFVLVGNIFVQSPEYAAVATSTASREMTTVAAPAGIYAPVATHPTPVSQPSADSIKKPQLKKFKHFEHSNSDERAHHSEGAVHSNSPTSSSSTHTSTSPGY* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01777 384 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
Lapu7g01777 384 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
Lapu7g01777 384 SUPERFAMILY Homeodomain-like 209 269 IPR009057 -
Lapu7g01777 384 MobiDBLite consensus disorder prediction 325 384 - -
Lapu7g01777 384 FunFam Myb family transcription factor 210 268 - -
Lapu7g01777 384 Gene3D - 210 268 - -
Lapu7g01777 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 339 IPR044787 GO:0003700|GO:0006355
Lapu7g01777 384 MobiDBLite consensus disorder prediction 179 212 - -
Lapu7g01777 384 MobiDBLite consensus disorder prediction 62 166 - -
Lapu7g01777 384 MobiDBLite consensus disorder prediction 340 363 - -
Lapu7g01777 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Lapu7g01777 384 MobiDBLite consensus disorder prediction 62 77 - -
Lapu7g01777 384 MobiDBLite consensus disorder prediction 364 384 - -
Lapu7g01777 384 MobiDBLite consensus disorder prediction 180 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01777 Lapu-Chr7 33423568 33426829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01777 4 329 G2-like Transcription Factor Family AT1G68670 46.286 2.83e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu7g01777 Myb_DNA-binding 3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01777 - - gmx:100796683 620.928