Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01761 ATGATTTCTTCTGGGATTAACTTGGTGATGACTGTGATTGGGTTTGCGGTGAGCACCATGTTCATTGTTTTCGTCTGCACCAGGCTCGTATGTGCTCGAATTCACTTGAATGCTGCAAGGAGATCCTTTCCTATTGTCTCCAGATCCAATCTCAGCATGTCAATTCGACATTTTGTTCGTGTTCAGATGGAACGGGGTTGCCATGGTCTCGAACGCGTGGCTGTGGCCAAATTTCCAACAAAGAAGTACAGTGACAAGTTTTTTGCTGCAGCAGAAAATTCTCAATGCACAGTCTGCCTCTCAGAATACCAAGGTGAGGACATGCTGCGTATCCTCCCTTATTGTGGACACTCCTTCCATGTGATCTGCATAGACCTATGGTTGCAGCAGAATTCCACATGTCCTGTCTGTCGAATATCGCTGCGTGAATTTCCAGATAGAAAGAGAGTAATGCAACCCTTGTTCAGCTCTGCTTTGCAGCCTCACTATGGCATAGAATCCTTTGACACACGTCATTATCACTGTATGATGGCTGATAATGGATTATCATCAAGAACCCCTGACAACCATGGGGTGAATCCTATAGAAGAAGATCATTTTCCATCTGAGGTTGGTGGAGCAGTTTCTATGGACAATATCACATGTTTAAGTGAGGGTGACTTCATTAAAGATGAAGGGAAGAAGCATGTAGAGAGTCCATCAAACTTCCAGAATTGA 717 0.4421 MISSGINLVMTVIGFAVSTMFIVFVCTRLVCARIHLNAARRSFPIVSRSNLSMSIRHFVRVQMERGCHGLERVAVAKFPTKKYSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVICIDLWLQQNSTCPVCRISLREFPDRKRVMQPLFSSALQPHYGIESFDTRHYHCMMADNGLSSRTPDNHGVNPIEEDHFPSEVGGAVSMDNITCLSEGDFIKDEGKKHVESPSNFQN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01761 238 PANTHER OS11G0150450 PROTEIN 1 196 - -
Lapu7g01761 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 143 IPR013083 -
Lapu7g01761 238 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Lapu7g01761 238 Pfam Ring finger domain 95 138 IPR001841 -
Lapu7g01761 238 SMART ring_2 96 137 IPR001841 -
Lapu7g01761 238 SUPERFAMILY RING/U-box 90 144 - -
Lapu7g01761 238 CDD RING-H2_EL5-like 95 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01761 Lapu-Chr7 33261367 33264890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01761 13 145 C3H Transcription Factor Family AT4G10150 36.296 2.16e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01761 - - gmx:100786109 443.351