Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu7g01739 | ATGAAGAAGTATCTCAGAGGAGAAGGTGCTAATTTGGAGGTTTTGAAGGATAAAAAGCTGAAGGGTCAACTAGCTGCTAAGGAACAGTTATATGGAAAATCTGCACAAGCTGCTGCTAAGGCCGAGAAGTGGCTTATGCCTAGTGAAGGAGGTTATCTAGAGGCTGAAGGCTTGGAAAAGACATGGAGGATCAAACAGGAGGCAATAGCTCATGAAGTAGATATCTCAAGCTCACGGAAACAGTATGATATTATTTTACCAGAACTTGGTCCGTACACTCTGGATTTTACTTCAAGTGGCCGGTATATGGCTTTGGGTGGTCGTAAGGGCCATCTAGGAATAGTGGACATGATAAATCTGAACCTAATTAGAGAGCTTCAGGTAACGGAAACAGTGCGGGATGTTGTATTCTTGCACAATGAGCTCTTTTTTGCTGCTGCTCAGAAAAGGTATCCCTACATCTATAATCGAGAAGGCACGGAGCTTCACTGCCTCAAGGAACATGGTCCAGTGATAAGGCTTCAGTTTCTGAAAAACCATTTTCTCTTAGCTACAATCAATAAATTTGGGCAACTTCGCTATCAAGATGTTACAATGGGTTCAATGGTTGGTAATTTTCGAACTGGCTTAGGACGTACAAATGTCATGCAAGTAAACCCCTTCAATGGGGTTGTTTCTTTAGGTCACTCAAATGGTACTGTTACCATGTGGAAGCCGACCAGTTCTGCTCCCCTTGTCAAGATGCTATGTCATCATGGGCCTGTCTCAGCGCTGTCATTTCACTCAAATGGTCACTTGATGGCCACTGCGGGGAAAGATAAAAAAATTAAGCTTTGGGACTTGAGGAAATTTGAGGTTCTTCAAACCTTACCCGGTCATGCAAATACTCTGGACTTTAGTCAAAAGGGCTTACTTGCTTGCGGTAATGGTTCATTGATCCAGGTTCTGCGTGATGTTTCTGGTACACAGAATTATTCCAGGTACATGACTCATTCCATGGTGAAAGGTTACCCGGTAGGAAAATTAATATTTCGACCATATGAAGATGTTTTAGGTATAGGGCATTCCATGGGTTGGTCTAGTATTCTTATTCCAGGAGCTGGAGAACCCAACTTTGACTCATGGGTTGCAAACCCGTTCGAAACTTCCAAACAGAGGAGAGAAAAGGAAATACGGGCTCTACTTGATAAACTCCCACCTGAGACTATCATGCTGGATCCCAGCAAGATTGGTACGGTGAAACCAAAAACAGAGAGGCTAACAAAGCAAGAGACAGAGGCTGAGATAGAAGCTGCCGTTGAAGCTGCTAAGGGCATGAAACTGAAGAAGAAGACAAAAGGAAGAAACAAGCCAGGTAAAAGGGTACAGAAAAAGCAAGAGGCAGTTACTAGAGTGAAGAGGCCCTATTTGGAGCAGAAAATTCAAGAAGAGGAAAACATGTCAAAAAAGAAGCAGAAAACTAGTGAGGGTGTTGAACTACCAAAATCTTTACAACGGTTTGCTCGTAAAAAAGCATCGTCATGA | 1524 | 0.4291 | MKKYLRGEGANLEVLKDKKLKGQLAAKEQLYGKSAQAAAKAEKWLMPSEGGYLEAEGLEKTWRIKQEAIAHEVDISSSRKQYDIILPELGPYTLDFTSSGRYMALGGRKGHLGIVDMINLNLIRELQVTETVRDVVFLHNELFFAAAQKRYPYIYNREGTELHCLKEHGPVIRLQFLKNHFLLATINKFGQLRYQDVTMGSMVGNFRTGLGRTNVMQVNPFNGVVSLGHSNGTVTMWKPTSSAPLVKMLCHHGPVSALSFHSNGHLMATAGKDKKIKLWDLRKFEVLQTLPGHANTLDFSQKGLLACGNGSLIQVLRDVSGTQNYSRYMTHSMVKGYPVGKLIFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEIRALLDKLPPETIMLDPSKIGTVKPKTERLTKQETEAEIEAAVEAAKGMKLKKKTKGRNKPGKRVQKKQEAVTRVKRPYLEQKIQEEENMSKKKQKTSEGVELPKSLQRFARKKASS* | 508 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu7g01739 | 507 | Pfam | WD domain, G-beta repeat | 249 | 280 | IPR001680 | GO:0005515 | |
| Lapu7g01739 | 507 | SUPERFAMILY | WD40 repeat-like | 85 | 355 | IPR036322 | GO:0005515 | |
| Lapu7g01739 | 507 | Pfam | BING4CT (NUC141) domain | 328 | 406 | IPR012952 | - | |
| Lapu7g01739 | 507 | MobiDBLite | consensus disorder prediction | 438 | 507 | - | - | |
| Lapu7g01739 | 507 | PANTHER | WD-REPEAT PROTEIN BING4 | 2 | 502 | IPR040315 | - | |
| Lapu7g01739 | 507 | Coils | Coil | 422 | 442 | - | - | |
| Lapu7g01739 | 507 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 248 | 282 | - | - | |
| Lapu7g01739 | 507 | Gene3D | - | 60 | 213 | IPR015943 | GO:0005515 | |
| Lapu7g01739 | 507 | Gene3D | - | 214 | 325 | IPR015943 | GO:0005515 | |
| Lapu7g01739 | 507 | SMART | WD40_4 | 241 | 280 | IPR001680 | GO:0005515 |
Showing 1 to 10 of 19 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu7g01739 | K14768 | - | gmx:100786818 | 934.48 |
Showing 1 to 1 of 1 entries