Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01719 ATGTCAGGAGAGGAAATCTTGCCATCCAACGAAGAAGAATATAACAAATCTCAGCCTCCATTTGGTAACAGAAGTGGCTACAATTCAAGAATAGGCATCTATCACTCCTTAGTTAAGCTTGACTCTAAGCATGAAATCCCAACAAAGCCTGACCTTAACACTGCCAATTTTGTGCTGTCACAGTTCCCACAAGCACACCTTGCTGAGGCAAAAACTGCATTCATTGATGCAGGAACTAATCTGAGTGTTAGCTATAGTGAGCTAAGAAGGTCTACCTACTCCCTTGCATCGGCTTTGTTCCATGGACTTGAGGTTAGGAAAGGTGATGTGGTATTTGTGTTGTCACCAAACTCGACCTTGTACTCAGCCATATGCCTAGCTGTGTTATCAGTTGGAGCAGTTCTGACCACTGCCAACCCCATCAACACTGCATCAGAAATTATGAAACAAGTGCGTGATTCGGGTGCTAAACTAGCCATCTCAGCACCAGAGGAGTTACACAAATTGGTCCCAACTGGGGTTCCTACAATTCTCACTTCTCGTTCTTCTGATGGCAGCATGCTATCAGTTGAAGAGTTAATGGAAGGCTGTTACAATTCAACAGAGTTGCCACAAGTTCCTGTGGCACAGTCAGAGACCGCTGCTATACTTTACTCTTCAGGGACCACAGGAATAAGCAAAGGTGTGGTTTTAACTCATGCAAATCTTATTTCCATAATGAGACTAGTTTTGTGGTCTGCTGAGGTCAGTGAATCCCGAGATGATATTTTCTTGGCCTTCATTCCAATGTTTCACATCTATGGACTTGTATTCTTTGGATTGGGATTGTTGTGTGTTGGTATCACAACAGTTTTGATGCGGAAGTATGACTTCCAAGATATGCTTGATGCAATCCAGAAGCACAAGGTTAACAACATACCAGCAGTGCCACCAGTGATCCTTGCGCTAGTAAAGCATTCACGGAAAGCTAGGTGTGACTTGTCCAGCCTAAGAAGGGTGGGGACAGGTGCTGCACCTTTGAGCAAGGAAGTGGCACAGGAGTTCCGGAAGATGTTTCCATGGGTTGAACTAAGGCAAGGTTATGGGCTAACAGAAAGTAGTGGTGGAGCAACATTTTTTGCCTCTGATAAAGATGCTAAAGCTCATCCAGATTCGTGTGGGAAGCTGATTCCAACATTTTTTGCAAAAGTTATAGACACTGAAACGGGGAAGCCTTTGCCGCCTTACAAAGAAGGAGAGTTGTGGTTAAAAAGTCCAACTATAATGAAAGGATATCTCGGAAATTTGGAGGCAACAAGTGCAACAATTGATTCAGAAGGTTGGTTGAGGACTGGTGATCTTGGTTACATTGATGATAATGGATTTGTTTACATAGTTGAACGGATAAAAGAGCTAATCAAGCACAATGGGTATCAGGTGGCTCCAGCAGAACTGGAGTCTGTGCTGCTAAGTCATCCTCTTATAGCTGATGCAGCAGTTATACCGGCGGAAGATGAAGAAACTGGACAGATACCAATGGCTTATGTGGTGAGAGCAGCTGGTTCTGAACTCTCAGAAGACCAAATCATTCAATTTGTTGCAGGCCAGGTGGCTCCGTATAAGAAAGTGAGAAGAGTGAGTTTCATTGACACTATTCCAAAGTCAGCTGCTGGAAAGATATTGCGCAAGGATCTTGTTTCACAAAGCAAATTTCAACCTGTCTCCAAGCTATGA 1713 0.4367 MSGEEILPSNEEEYNKSQPPFGNRSGYNSRIGIYHSLVKLDSKHEIPTKPDLNTANFVLSQFPQAHLAEAKTAFIDAGTNLSVSYSELRRSTYSLASALFHGLEVRKGDVVFVLSPNSTLYSAICLAVLSVGAVLTTANPINTASEIMKQVRDSGAKLAISAPEELHKLVPTGVPTILTSRSSDGSMLSVEELMEGCYNSTELPQVPVAQSETAAILYSSGTTGISKGVVLTHANLISIMRLVLWSAEVSESRDDIFLAFIPMFHIYGLVFFGLGLLCVGITTVLMRKYDFQDMLDAIQKHKVNNIPAVPPVILALVKHSRKARCDLSSLRRVGTGAAPLSKEVAQEFRKMFPWVELRQGYGLTESSGGATFFASDKDAKAHPDSCGKLIPTFFAKVIDTETGKPLPPYKEGELWLKSPTIMKGYLGNLEATSATIDSEGWLRTGDLGYIDDNGFVYIVERIKELIKHNGYQVAPAELESVLLSHPLIADAAVIPAEDEETGQIPMAYVVRAAGSELSEDQIIQFVAGQVAPYKKVRRVSFIDTIPKSAAGKILRKDLVSQSKFQPVSKL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01719 570 CDD 4CL 46 558 - -
Lapu7g01719 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 45 560 - -
Lapu7g01719 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Lapu7g01719 570 Gene3D - 464 565 IPR045851 -
Lapu7g01719 570 Gene3D - 41 463 IPR042099 -
Lapu7g01719 570 FunFam 4-coumarate--CoA ligase 2 464 564 - -
Lapu7g01719 570 Pfam AMP-binding enzyme 69 467 IPR000873 -
Lapu7g01719 570 MobiDBLite consensus disorder prediction 1 23 - -
Lapu7g01719 570 FunFam Long-chain-fatty-acid--CoA ligase FadD 43 463 - -
Lapu7g01719 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Lapu7g01719 570 SUPERFAMILY Acetyl-CoA synthetase-like 64 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01719 Lapu-Chr7 32745828 32747979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01719 24 559 Monolignol Biosynthesis Gene Families AT1G20500 44.424 3.20e-156 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01719 K10526 - gmx:100783104 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01719 7 32745828 32747979 Lapu7g01719 7 32745828 32747979 ECH