Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01717 ATGGCACCGATGGGCCCCGGCTTCCGATTCCACCCCACCGACGAAGAGCTCGTGGGCTTTTACCTCAAGCGCAAGATCACCGGAAATCTCTCCCGGTATGACCACATCGCCGTCGTCGACGTCTACAAGCTCGAGCCCTGGGACCTTCCCCCTCTGTCCAAGCTGAAGACCAAGGACTTGGAATGGTACTTCTTCAGCGTGCTCGACCGCAAGTACGGAAATGGCTTCCGGACCAACCGCGCCACCGATAAGGGCTACTGGAAGACCACCGGAAAAGACCGCCCCGTGGCCCACGGCGGCCGCACCGTCGGGATGAAGAAGACCCTCGTTTACCACATCGGCCGGGCCCCAAACGGCCTTCGCACCAATTGGGTCATGCACGAGTACAAGATGCTCGAGGAAGAATTGAGTCGTGCCGGCAAAGTGCTGGATGTGTATGTGGTGTGTAGGATTTTCGAGAAGAGTGGTGCTGGACCAAAGAATGGGGCCAAGTATGGTGCTCCCTTGGACGAGAAGGAGTGGGATGTGGAGGAGGAGAATGAGCAGAAGGAGGTGGTTTCGATGCTGGGCACTGGCCATCATGTGGTGCCTCCGTTGACGGAGACCCCTGATAACGTGATTGCTCCGTTGACGGAGATCCCTGGTAACGTGGTTGCTCCTCCTTTGCCGGTGGCAGCTGCGGTGGTTCCTCCCTTGGCGGTTGATGATGATGACTCTTGGAATATTGGGGCCTTTTTGGAGACTGACGACCTTGACGGGGATCTTGATTTGAGTGATATGATTGGGAGTGTTACTTTTCCATCATCGAACTTTCATCCCGGGGAGTGTAGTACCCACGCTGAGAATTCCCAAGAACTCATCAAGGATCAGGAGCCATTGGCAGGCGACTTTGGAGTTTCTGGGCCTGAATATGGACAGCCTTTTGATATGGCTGAGCAACATGGCATGGGCACTAGTGCAGTGAAAGATGGGGACAATGGTGAGCTGAGCGAGATTGAAAATCTTCTCAATTTCGATGATGCATCGGGTAATATGGATCTAGATCTATATTTTGATGCCACCCAGAATCTTCCAACGGCTGATGATGAATCATTCTTGGAAACCAATGATCTTGCAATTGGGAATGAGGGTAATCCTAATGAGGCCGATCCTTCTGCGAATGATATGCTAGACGACTATCTTGCACTCCCTGATGATGATATTTGCAATTATATATCTTTTGATTTTCCTCAGAATCGAGAGAGTGAAAACTGTAATTGGAACCAAGGATCACCTTTCACCCAGCAGACTGTGGAGGGAGAAACCGCTGATAAAACTGTGGTTAGTAAACATGATTCTGAAGCACAAACCAGCAATGAAGCTTTTTCTGTGCAGAATACAGAGGAGGCAAAGTTAGCACCAGGAAATACAAATCCATTTGTTAAGCAGGCCTATGGATGGTTAGCTAGCATACCTGCTGCACCTGCACATGCTTTTGAGTTTCCAGCTAAGGATATTACTCTTGGGATTCATCATGCAGCTCAGTCTTCCCATCCAGCTCATATAACTACAGGTATGATCAGCATAACAGACATTGCTTTTAGAGGCAATGCGATGGATTGGCCGATGGGCAAAAATGGAGGGTTTAACACTGCAATATCTACTGGGTTTTCTCAATCGGATGTTAATTGTGCTGCTTTGATACCTGTTTCTGGCAAGACCGCATTTGTGTTGTCACATGGCTGGATTTTATTGACGGGTTTCTCAGTTCTTATTCTTTCACTTAGTTTCAAAATTGGAAGCATCATGTATACTGGTAAGTGA 1803 0.4914 MAPMGPGFRFHPTDEELVGFYLKRKITGNLSRYDHIAVVDVYKLEPWDLPPLSKLKTKDLEWYFFSVLDRKYGNGFRTNRATDKGYWKTTGKDRPVAHGGRTVGMKKTLVYHIGRAPNGLRTNWVMHEYKMLEEELSRAGKVLDVYVVCRIFEKSGAGPKNGAKYGAPLDEKEWDVEEENEQKEVVSMLGTGHHVVPPLTETPDNVIAPLTEIPGNVVAPPLPVAAAVVPPLAVDDDDSWNIGAFLETDDLDGDLDLSDMIGSVTFPSSNFHPGECSTHAENSQELIKDQEPLAGDFGVSGPEYGQPFDMAEQHGMGTSAVKDGDNGELSEIENLLNFDDASGNMDLDLYFDATQNLPTADDESFLETNDLAIGNEGNPNEADPSANDMLDDYLALPDDDICNYISFDFPQNRESENCNWNQGSPFTQQTVEGETADKTVVSKHDSEAQTSNEAFSVQNTEEAKLAPGNTNPFVKQAYGWLASIPAAPAHAFEFPAKDITLGIHHAAQSSHPAHITTGMISITDIAFRGNAMDWPMGKNGGFNTAISTGFSQSDVNCAALIPVSGKTAFVLSHGWILLTGFSVLILSLSFKIGSIMYTGK* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01717 600 Gene3D NAC domain 13 157 IPR036093 GO:0003677|GO:0006355
Lapu7g01717 600 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 258 - -
Lapu7g01717 600 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Lapu7g01717 600 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Lapu7g01717 600 ProSiteProfiles NAC domain profile. 4 154 IPR003441 GO:0003677|GO:0006355
Lapu7g01717 600 FunFam Nac domain-containing protein 86 13 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01717 Lapu-Chr7 32726765 32730966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01717 4 596 NAC Transcription Factor Family AT5G04410 34.360 1.48e-99 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu7g01717 NAM 1.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01717 - - vun:114191703 957.592