Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01707 ATGGGTCCTTTTCTCTCTCTTCTTCCCTTCGTGGCCTTTCACGTTTCACTCCACAACAACAACAACAACAACACCAAGGAAAAGGAGAACGGGATTAGGATGTTTTCTAGGTTGATACATCCCCATGAAGGGGGTGTTGGGCAGGAAGACATGCAGGGTGCTTCCAATCACGCTCACCTTGGAGACCCTTGTCTTGTTCTCACCTCTGATCCCAAACCTCGTCTTCGTTGGACAGCTGACCTTCACGAACGCTTTGTTGACGCTGTCACTCAACTTGGGGGTGCCAGTAAAGCCACTCCAAAGGCGATCATGAGGACCATGAATGTCAAGGGTTTGACACTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAATCAGGAAAAGATTCTGACGAGGGATGCAAAGATGGGATGTCAGGTTCGTATCTTCAAGAAAGCCCTGGTACTGATAACTCATCTCCGAAGTTACCAGCTTCGGATGCAAACGAGGGTCATGAAGTCAAGGAGGCGTTAAGAGCACAAATGGAAGTGCAAAGTAAGCTACACTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAGGATGCAGAGCGGAGGTACATGGGCATGCTTGAGCGAGCATGTAAGATGTTGGCCGATCAATTTATTGGGGACATAATTATGGACACAGATGGCCAAAAATTTCAAGGGCTGGAAAGCAAAACACCCAGAAGTTCCGTAGTTGATCACGTTGGGTTTTTCCCCCCAGTGTGTTCTGAGGTAGGTGGAATGCATGTTTCAGAAGTACCACCTATTCTGCAGCCTCAAGGGGCTGACTGTTCCACTGAAAGTTGCCTAACATCACTTGAGAGTCTGGGAGGGTTGACACTAGAAGGATCTCCGGGTGGATCAAAGAAGAGGATGCTGAGCTTGGATTCAATGGTAGCACCTTTGCTCTGGAGTGAAGCCAACACCAGAACTCAAGGAATCCATTTAGCTCAAGTCAATCCTCCAGGAATAACTAGGTATGGCATGTAG 1032 0.4767 MGPFLSLLPFVAFHVSLHNNNNNNTKEKENGIRMFSRLIHPHEGGVGQEDMQGASNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGMSGSYLQESPGTDNSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLADQFIGDIIMDTDGQKFQGLESKTPRSSVVDHVGFFPPVCSEVGGMHVSEVPPILQPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRMLSLDSMVAPLLWSEANTRTQGIHLAQVNPPGITRYGM* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01707 343 SUPERFAMILY Homeodomain-like 72 128 IPR009057 -
Lapu7g01707 343 Gene3D - 71 129 - -
Lapu7g01707 343 Pfam MYB-CC type transfactor, LHEQLE motif 170 215 IPR025756 -
Lapu7g01707 343 MobiDBLite consensus disorder prediction 146 162 - -
Lapu7g01707 343 FunFam Myb family transcription factor 71 129 - -
Lapu7g01707 343 MobiDBLite consensus disorder prediction 126 169 - -
Lapu7g01707 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 42 240 IPR044848 GO:0003700
Lapu7g01707 343 Pfam Myb-like DNA-binding domain 75 125 IPR001005 -
Lapu7g01707 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 129 IPR017930 -
Lapu7g01707 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01707 Lapu-Chr7 32629349 32633119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01707 41 287 G2-like Transcription Factor Family AT3G24120 45.946 8.25e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu7g01707 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01707 - - vum:124825518 589.726