Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01700 ATGGGGTGTCTCTTGCTGTTTCTGTGTTTTTCTAGCTTTTTATATGCTGCTTCTGCCTTAAACTCTGATGGGTTGGCTTTGTTGTCTCTCTCCCGGGACTGGACTGTTGGGTCTGGTGACATAAATTCCACGTGGCAGATGTCTGATTCCACTCCATGCTCGTGGGCAGGAGTGCGTTGTGATCATGCCAATAATGTGAATTCTCTAAACCTCAGTGGATATTCCATTTTTGGCCAACTAGGACCTGACATTGGACGTTTGATTCACTTGCAAACCATAGACTTATCATTTAACCATATGTTTGGAAAAATTCCCCCAGAATTAAACAACTGTAGCATGGTTGAGTACATGGACCTTACTGTAAACAACTTTAGTGGAGGAATACCAGAGAGCTTTAGAAACTTCCAAAATTTGAAGTATGTGGATCTCTCCTCTAATCTGCTGAATGGTGAAATTCCTAAATCTTTTTTGGAAATTCCTCTCCTGGAAGAAGTGTATCTTAGTAACAACAGTTTGAGTGGTTCCATTCCCTCAATTATTGGGAATATGACTAACCTTATCACGCTGGATCTTGCTTATAATCAGCTGTCAGGGACTATTCCCATATCCATTGGAAATTGTAGTAAATTAGAGAATCTGTATTTGTCAGGTAATGAATTGCGGGGAGTTATTCCTGAGAGTCTAAATAATCTAAAAGATCTTCTTGAGTTATATCTCAATCGTAATAGTTTTGGAGGTACTATTCAATTGGGATCTAGAAATTGCAAAAAGTTATCTATTCTGAGCCTGTCTTTCAATAACTTTAGTGAGGGAATACCATCAAGCTTGGGGAATTGTACTGGCCTAATAGAGTTTTATGCTGCAGGGAGTAACTTTGTTGGCAGTATACCATCAACCTTAGGCCTCCTACCCAGCCTTTCTTTTGTATATATTACACAGAACCAATTATCTGGGAAAATACCTCCACAGATTGGTAATTGCAAATCACTGGAAGAGTTGTATTTGAATTCCAATGCACTCGAAGGAGAAATTCCTAGTGAACTGGGAAACTTGAGTAAATTACGCGATCTTAGATTGTATGAAAACCTTTTGACAGGAAAAATTCCACTTGGAATATGGAAAATTAAAACACTTGAGCAGATCCATGTATACAGTAATAACCTTTCAGGTGAGCTACCTCTTGAGATGGCAGAGCTTAAACATCTTAAGAATATCTCCTTGTTTAATAATCAGTTATCTGGAGTCATTCCTCAAAGCTTAGGAATCAACAGCAGTTTGGTTGTGTTAGACGTCACGTATAATAATTTCACCGGTGCCCTCCCACCAAATCTTTGCTTTGGAAAGCAATTGGTGAGGCTGAATATGGGTGGCAATCAATTTTATGGCAGCATACCTCCTGATATTGGAAGGTGCCCAACTCTTACGAGGCTGAGACTTGAAGAAAACAATTTGACTGGGGCACTTCCTGATTTTGAAATCAATCCAAATCTCTTTCACATGAGCATCAACAACAACAATATCCGTGGAGCAATTCCATCAAGTTTAGGAAACTGCACAAATCTTTCTCTTTTAGATTTATCCATGAACAGCTTGACAGGCCTTGTACCCTCAGAGCTAGGAAACCTAGTGAATCTCCGGACTTTGGGTCTTTCTCACAATGCTTTGAGAGGTCCTTTGCCACATCAACTGTCAAACTGTAACAAAATGATCGAGTTTGATGTTGGATTCAATTTCTTGAATGGTTCGTTTCCATCAAGTTTTCGGAACTGGACTGAATTAACAACTTTAATTCTCTCCGAGAATAATTTTGATGGTGGTATCCCAGCTTTCTTGCCAGAATTTAAAAGGCTCAATGATTTACGACTTGGAGGAAACATGTTTGGAGGAAACATTCCTAAATCAATTGGAGAACTGGTGGATTTGATCTATGATCTAAATCTAAGTGCTAATGGGCTGATTGGTGAGCTTCCTAAGGAGATAGGGAACCTGAAGAATCTGGTAAAACTGGATCTATCTTGGAACAATTTGACAGGAAGTATACAAGTTCTCAATGAGCTGAGTTCATTATCCGAGTTCAACGTTTCATATAATTCTTTTGAAGGTCCTGTGCCTCAAAAGCTAACAAATTTTCCCAATTCTTCTTTAACGTTTTTGGGCAATCAAGGCCTATGTACCTCAAATTTCACCGAAAGCAGCTATTTAAGGCCGTGTGACACAAATTCAAGAAAGTCAAAAAAACTCAGTAAAGTTGCAATTGTGATGATAGCACTTGGATCCTCAATATCTGTTCTTCTGCTGCTGGGTTTAATTTATATATTCTTTATCAGAAAAATTAAGCAGGAAGCCACAACCAATGAGGAAGATGATTCTCCATCCCTTCTCAATATGGTTTTGGAAGCTACAGAACATCTAAATGATCGGTATATTATTGGCAGAGGAGCTCAAGGAGTTGTTTATAAAGCAGCACTTGGTCCAGACAATATTTTGGCTATAAAGAAGTTTGTATTTGCTAGTGAGGAAGCGAAAAGCTCAAGCATGACCAGAGAAATTCAAACCCTTGGAAAGATTAGGCATCGAAATTTGGCCAAATTGGAAGGCTGCTGGTTGAGAGAAAACTATGGTCTAATTGCATACAAATACATGCCAAATGGAAGCTTACATGATGCTTTGCATGAGATGAATCCACCACAACCCTTAGAGTGGAATGTCCGGAATAAGATAGCTGTTGGAATTGCTCATGGATTGGCCTATCTCCATCATGACTGTGATCCTGTTGTAGTGCACAGAGACATCAAAACAAAAAATATACTTCTAGATTCTGAGATGGAGCCTCATATTGCAGATTTTGGTATTGCTAAGCTTTTGGATCAGCCTTCTACCTCCACACAGTCAATATATGTCACTGGTACACTTGGTTATATACCACCAGAGAATGCTTATACAACTACAAAGGGTAAAGGGTCCGATGTATACAGTTATGGGGTAGTATTGCTGGAGCTGATATCCAGAAAGGAGGCATTGGATCCATCATTTATGGAAGGAACAGATATAGTACATTGGGCTAGATCTGCCTGGGAGGAAACAGGAGTTGTTGATAAAATTGTTGATTCACAATTGGCTGATGAAATTTCAAATTCTGATGTGATGAAACAAGTTACAAAGGTGCTTTCGGTGGCTCTGAGATGTACATTAAAGGATCCACGCAGCAGACCTACGATGAGGGATGTTATCAAGCATTTGCATGCAGATGCTAAAAACTCCACATAA 3267 0.3921 MGCLLLFLCFSSFLYAASALNSDGLALLSLSRDWTVGSGDINSTWQMSDSTPCSWAGVRCDHANNVNSLNLSGYSIFGQLGPDIGRLIHLQTIDLSFNHMFGKIPPELNNCSMVEYMDLTVNNFSGGIPESFRNFQNLKYVDLSSNLLNGEIPKSFLEIPLLEEVYLSNNSLSGSIPSIIGNMTNLITLDLAYNQLSGTIPISIGNCSKLENLYLSGNELRGVIPESLNNLKDLLELYLNRNSFGGTIQLGSRNCKKLSILSLSFNNFSEGIPSSLGNCTGLIEFYAAGSNFVGSIPSTLGLLPSLSFVYITQNQLSGKIPPQIGNCKSLEELYLNSNALEGEIPSELGNLSKLRDLRLYENLLTGKIPLGIWKIKTLEQIHVYSNNLSGELPLEMAELKHLKNISLFNNQLSGVIPQSLGINSSLVVLDVTYNNFTGALPPNLCFGKQLVRLNMGGNQFYGSIPPDIGRCPTLTRLRLEENNLTGALPDFEINPNLFHMSINNNNIRGAIPSSLGNCTNLSLLDLSMNSLTGLVPSELGNLVNLRTLGLSHNALRGPLPHQLSNCNKMIEFDVGFNFLNGSFPSSFRNWTELTTLILSENNFDGGIPAFLPEFKRLNDLRLGGNMFGGNIPKSIGELVDLIYDLNLSANGLIGELPKEIGNLKNLVKLDLSWNNLTGSIQVLNELSSLSEFNVSYNSFEGPVPQKLTNFPNSSLTFLGNQGLCTSNFTESSYLRPCDTNSRKSKKLSKVAIVMIALGSSISVLLLLGLIYIFFIRKIKQEATTNEEDDSPSLLNMVLEATEHLNDRYIIGRGAQGVVYKAALGPDNILAIKKFVFASEEAKSSSMTREIQTLGKIRHRNLAKLEGCWLRENYGLIAYKYMPNGSLHDALHEMNPPQPLEWNVRNKIAVGIAHGLAYLHHDCDPVVVHRDIKTKNILLDSEMEPHIADFGIAKLLDQPSTSTQSIYVTGTLGYIPPENAYTTTKGKGSDVYSYGVVLLELISRKEALDPSFMEGTDIVHWARSAWEETGVVDKIVDSQLADEISNSDVMKQVTKVLSVALRCTLKDPRSRPTMRDVIKHLHADAKNST* 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01700 1088 Pfam Protein kinase domain 809 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01700 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Lapu7g01700 1088 SMART serkin_6 804 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01700 1088 Gene3D Ribonuclease Inhibitor 20 179 IPR032675 -
Lapu7g01700 1088 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 448 1075 - -
Lapu7g01700 1088 Gene3D Ribonuclease Inhibitor 182 252 IPR032675 -
Lapu7g01700 1088 PRINTS Leucine-rich repeat signature 521 534 - -
Lapu7g01700 1088 PRINTS Leucine-rich repeat signature 542 555 - -
Lapu7g01700 1088 SUPERFAMILY L domain-like 23 311 - -
Lapu7g01700 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 179 308 - -
Lapu7g01700 1088 Gene3D Ribonuclease Inhibitor 254 446 IPR032675 -
Lapu7g01700 1088 FunFam Leucine-rich receptor-like protein kinase family protein 320 418 - -
Lapu7g01700 1088 SMART LRR_typ_2 663 686 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 542 566 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 183 207 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 518 541 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 303 327 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 208 230 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 87 111 IPR003591 -
Lapu7g01700 1088 SMART LRR_typ_2 328 351 IPR003591 -
Lapu7g01700 1088 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 772 880 - -
Lapu7g01700 1088 Gene3D Phosphorylase Kinase; domain 1 774 880 - -
Lapu7g01700 1088 ProSiteProfiles Protein kinase domain profile. 804 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01700 1088 Gene3D Ribonuclease Inhibitor 449 746 IPR032675 -
Lapu7g01700 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 178 - -
Lapu7g01700 1088 Gene3D Transferase(Phosphotransferase) domain 1 881 1088 - -
Lapu7g01700 1088 SUPERFAMILY Protein kinase-like (PK-like) 795 1080 IPR011009 -
Lapu7g01700 1088 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Lapu7g01700 1088 ProSiteProfiles Leucine-rich repeat profile. 665 687 IPR001611 GO:0005515
Lapu7g01700 1088 FunFam Serine/threonine-protein kinase-like protein CCR4 881 1088 - -
Lapu7g01700 1088 SUPERFAMILY RNI-like 313 680 - -
Lapu7g01700 1088 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 448 733 - -
Lapu7g01700 1088 Pfam Leucine rich repeat 495 555 IPR001611 GO:0005515
Lapu7g01700 1088 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01700 Lapu-Chr7 32567295 32571225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01700 11 1086 Receptor kinase-like Gene Family AT1G73080 49.726 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu7g01700 Pkinase 7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01700 - - gmx:100817655 1731.84