Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01681 ATGGCTGTGAACAAAAATCTAAAGCTTATTCAACTTATTCTTCTGATCCTGGCAGCTTCAAAAGCAGCATCTCAACCCTCTTCAGATTGCCCCAGAAGCTGTGGCAATCTAAACATTCCTTACCCTTTTGGGACACGTGAGGGTTGTTACATGAACCACACTTTCCTCATCACTTGCAACCATGATAACTCCTCCACGTCCATTCCTTTATTGGGAACACACAGCAACACTGTGGTACTCAACATATCACTAGAAGATGGGGAAATTCTAGTTTCGAGTCCCATAATCCATGATTGCTATGGCACCAAAAGCAATAGTTCGAAGGACCAAAATGGTCTCAATTTGACCTACTTTTCAATCTCACCAAGTAGGAACAAGTTCACAGCAGTTGGTTGTGACACGGTTGGAGTATTCATGGGTTACGATAGCAACAAAAAACATGTTACAACAACAGGGTGTGTATCCATATGTGACACACTTGGTGAAATCAGAAGTAATGGATCATGCGATGGCATTGGTTGTTGCCAAATTGGTGTTCCCGATGGAGTATATGGTTTTTCAATGCAAAGTTGGAGCAAGAACAACCACTCCACCGTACGTGACTTCAATCCTTGTAACTATGCGTTTACGGTTGCGGAAGGGTACTACAACTTCGAAGCAACAAATCTTAAGAGCCTCGAGAATACGAGGTTGCCCTTGGTGCTTGATTGGGCTGTGGGAAATCAAACCTGCGAAGAGGCCAAACAACATCCCAGTAGCTATGCGTGCAAGGATAAGAACAGTGATTGCCTTCAACCAACAAATGGGATTGGTTATGGTTGCAAATGCCATCATGGTGGAAACCCTTACCTCTATGATGGTTGCCATGATAAAGATGAATGCGCTTTGAACATCAATCCATGCATCTACAAGAAAACCTGCAAAAACGTTCCTGGAGAAGGTTCCAAGTGCTCATGTCCAAAGAGCCACGAAGGAGATGGACTTAGAAATGGCCAAGGTTGCAGACTCAAAAAAGACAAAAACATAGGGAATCTCATACTTATAATTGGATTGAGTTTGAGCTTAAGTCTATTGGCAGTGGTTGTGGGATGCCTAAACATATACCCTCAAATCCGTGAAAGAAAGCTCATGAAAATGAGAGACAGCTATTTTCAAAAAAATGGTGGTATGTTATTGCAAAGACAGATTGATTCTCTCAATGGCTCAACTGAAAGAGCTACAATTTTCACAGTTGAGGAGCTCAAGAAAGCTACCAACAACTATGATGATGATAGAATCATAGGCAAAGGAGGCCACGGAACAGTGTACAAGGGTATATTATCAAATGGCAGGGTTGTTGCCATCAAAAAGTCCATGGTTTCCAACGAAACTGAGATTGGGCAATTCATCAATGAAGTGGTTGTGCTTTCCCAGATCAACCATAGGAATGTTGTCAAACTACTAGGTTGTTGTTTGGAGACAGAGTTTCCCTTACTTGTTTACGAGTTCATCACTAATGGTACCCTTTGTGAGCATCTACATTTTGAAGGTGAGGCATGTGATGATAAACACAAACTTTCATGGACAGCACGTTTGAGAATTGCAGCAGAGACAGCTGAGGCTCTTGCATACTTGCATTATTCTGTTTCCACTCCAATCATACATAGAGATGTTAAAACTGCAAATATTCTTCTAGATGACAACCTCACAACCAAGGTTTCTGACTTTGGGGCTTCCAAGTTTGTTCCTCTTGATCAAGATCAGTTAACCACTTTGGTGCAAGGAACCATGGGTTACCTTGACCCTGAGTACCTACGAACAAGCCAACTAACTGAGAAGAGTGATGTTTATAGCTTTGGTGTTGTCCTTGCAGAACTGTTGACAAGTAAGAAGGCACTTTCATTTTTTAGGCCTCAGGCTCACAGAAATTTGTCCTTGTATTTTGTTTCTGCAATGAATGAGGGTCGGTTGGATCAAATATTGGACAACGAAATTGTGAGTGATGCAAGTGTTGAGTATGTGATAGAAGTTGCTAATCTAGCCAAAAGGTGTCTTAGGCTGAATGGAGAAGAAAGACCAACCATGAAAGAAGTTGCAATGGAGTTGGAGGGAATAAGGGTCATGGAAAAACATTCACTTGGAGGAGCAAAAGATGTTGCATCCCACGAAGAAACAGAGAGCTTTCTCAAAGCACGTTCTAATTTCGATATGGTTGATCATGGAGATGGTACCAGTGGTACTACTACCAGTACATTTTCTAGGTTCTATAATTTGCATAACCAGATTTTGGAACCACTGGGAGATGGA 2286 0.4173 MAVNKNLKLIQLILLILAASKAASQPSSDCPRSCGNLNIPYPFGTREGCYMNHTFLITCNHDNSSTSIPLLGTHSNTVVLNISLEDGEILVSSPIIHDCYGTKSNSSKDQNGLNLTYFSISPSRNKFTAVGCDTVGVFMGYDSNKKHVTTTGCVSICDTLGEIRSNGSCDGIGCCQIGVPDGVYGFSMQSWSKNNHSTVRDFNPCNYAFTVAEGYYNFEATNLKSLENTRLPLVLDWAVGNQTCEEAKQHPSSYACKDKNSDCLQPTNGIGYGCKCHHGGNPYLYDGCHDKDECALNINPCIYKKTCKNVPGEGSKCSCPKSHEGDGLRNGQGCRLKKDKNIGNLILIIGLSLSLSLLAVVVGCLNIYPQIRERKLMKMRDSYFQKNGGMLLQRQIDSLNGSTERATIFTVEELKKATNNYDDDRIIGKGGHGTVYKGILSNGRVVAIKKSMVSNETEIGQFINEVVVLSQINHRNVVKLLGCCLETEFPLLVYEFITNGTLCEHLHFEGEACDDKHKLSWTARLRIAAETAEALAYLHYSVSTPIIHRDVKTANILLDDNLTTKVSDFGASKFVPLDQDQLTTLVQGTMGYLDPEYLRTSQLTEKSDVYSFGVVLAELLTSKKALSFFRPQAHRNLSLYFVSAMNEGRLDQILDNEIVSDASVEYVIEVANLAKRCLRLNGEERPTMKEVAMELEGIRVMEKHSLGGAKDVASHEETESFLKARSNFDMVDHGDGTSGTTTSTFSRFYNLHNQILEPLGDG 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01681 762 ProSiteProfiles Protein kinase domain profile. 421 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01681 762 FunFam Wall-associated receptor kinase 2 391 496 - -
Lapu7g01681 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Lapu7g01681 762 Pfam Protein kinase domain 421 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01681 762 CDD STKc_IRAK 427 698 - -
Lapu7g01681 762 SUPERFAMILY Protein kinase-like (PK-like) 404 696 IPR011009 -
Lapu7g01681 762 Gene3D Transferase(Phosphotransferase) domain 1 497 718 - -
Lapu7g01681 762 Pfam Wall-associated receptor kinase galacturonan-binding 30 91 IPR025287 GO:0030247
Lapu7g01681 762 Gene3D Phosphorylase Kinase; domain 1 386 496 - -
Lapu7g01681 762 FunFam Wall-associated receptor kinase 2 497 719 - -
Lapu7g01681 762 SMART serkin_6 421 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01681 762 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 706 IPR045274 GO:0007166
Lapu7g01681 762 ProSitePatterns Protein kinases ATP-binding region signature. 427 450 IPR017441 GO:0005524
Lapu7g01681 762 ProSiteProfiles EGF-like domain profile. 290 326 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01681 Lapu-Chr7 32385585 32390002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01681 6 700 Receptor kinase-like Gene Family AT1G21230 45.042 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lapu7g01681 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01681 - - vun:114190859 1283.86