Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01677 ATGAAGGATACATTTCCAAAGAAGGAAATCTTCACTCAAAAGAAATTTCCAACTTATTTGCAAGAAATGGCAACAGGATCAAAGTTTTTGGACAATGCAATGATAAGAGGTTCTCACTCTCTCACTGCTTCTAACCATCTTCATGCCTTAAGAAGTGGGGCAAACTCATCAATACCATCATCTCAACAACTTCTTTCATGTTCAAATCCCATTTCAATGAAAGAAGAGGCACCTTTAGCCACATGGATTAGTCATATCCCTGCAAAGTTCAATGGCCCTGAAGACGTAAAAAATGTCAGAGAGAAAAACCAATCCAATTCTATCTTCCCAGACTCGGATATAAAAAATAGTTCCATTCCTCTAAATCTTTTGGAAACTCTCCCACCCTTAACTATGGCACCATGTTTTGATGAGACAGTTGCTTCTTTAGCCTCTTCTTCTGCCCCACCCAATTTTCCAAACTTGACTTTGTTTTTGCAGGAACCCTCCTTGGTGTACTCATCATCCTCAAATATGAAAGGTGGTGAAGTCATTTCTGTAACTTCAGACCCCACCTATCAAGAACCTCACTTTGGGCAAAGCCCGCATCAAGCAGGTTGTGATGCACACAAAATGAACAAGAACCTAACAAATTCTCGGTCCAAGTCTTTCAATGAGAATTTGTTGAGTACCACTAGGACTCAGCCTATGAAGTATGGTGGAAGAGGCAAGCTGTTTAAAGGGGTGAGGCAGAGACACTGGGGAAAATGGGTTGCTGAGATTAGATTACCAAGAAACAGGACAAGGGTTTGGCTAGGGACTTTTGACACAGCTGAAGATGCTGCCATTGCATATGACACAGCAGCATACATACTAAGAGGAGAATATGCTCAGTTGAACTTCCCAGATCTCAAGCACGTAATCCAGGCCAATTCTCTGAATGGAACCACTGCTGCACTGGTGGAGGCAAAACTACAAGCAATATCACAAGGTGTTTCTTCTCATAGGAAGCCTACTGACTCACCAGCAGAATCAAGCAATAAGCACACTGATGAGAATGGAAAATTGAAAAGTACAAATAGCGAGGATTCAACCATGAAGGAGTGGCAGTTTGATACCGAGAGAAGCAAAAGTCCACACCATGAGATATCAGATGTGGAAACTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATGAACTTTTAGTCTCTAATTCATGA 1215 0.4156 MKDTFPKKEIFTQKKFPTYLQEMATGSKFLDNAMIRGSHSLTASNHLHALRSGANSSIPSSQQLLSCSNPISMKEEAPLATWISHIPAKFNGPEDVKNVREKNQSNSIFPDSDIKNSSIPLNLLETLPPLTMAPCFDETVASLASSSAPPNFPNLTLFLQEPSLVYSSSSNMKGGEVISVTSDPTYQEPHFGQSPHQAGCDAHKMNKNLTNSRSKSFNENLLSTTRTQPMKYGGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISQGVSSHRKPTDSPAESSNKHTDENGKLKSTNSEDSTMKEWQFDTERSKSPHHEISDVETVQLSRMPSLDMDIIWDELLVSNS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01677 404 SMART rav1_2 238 301 IPR001471 GO:0003700|GO:0006355
Lapu7g01677 404 MobiDBLite consensus disorder prediction 323 380 - -
Lapu7g01677 404 Gene3D AP2/ERF domain 238 296 IPR036955 GO:0003700|GO:0006355
Lapu7g01677 404 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 102 399 - -
Lapu7g01677 404 PRINTS Ethylene responsive element binding protein signature 261 277 IPR001471 GO:0003700|GO:0006355
Lapu7g01677 404 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Lapu7g01677 404 MobiDBLite consensus disorder prediction 334 380 - -
Lapu7g01677 404 SUPERFAMILY DNA-binding domain 238 296 IPR016177 GO:0003677
Lapu7g01677 404 FunFam Ethylene-responsive transcription factor 2 237 296 - -
Lapu7g01677 404 CDD AP2 237 297 IPR001471 GO:0003700|GO:0006355
Lapu7g01677 404 ProSiteProfiles AP2/ERF domain profile. 238 295 IPR001471 GO:0003700|GO:0006355
Lapu7g01677 404 Pfam AP2 domain 239 287 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01677 Lapu-Chr7 32369312 32370526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01677 42 399 AP2-EREBP Transcription Factor Family AT4G13620 41.734 4.80e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01677 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01677 - - gmx:100820013 644.425