Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01670 ATGAACAATGAGGATCATGGCATTTCAGGCAAGCTATATAAAGATGCGGTGAGTTTTGATTTTGGCGACAACATCTCTTCTGTTGATGATGGACATGTATGTGTACTGACGGGTGAAGAGTTTTCTGCAGAGTTCTTACGCGATCGAGTTGCCTTAAGAAGAATTCCTGTCATAACTGACACAGACCTGTATCTGCCAAACAGGTTGGATGTTAATAATTATCAGTTGGTTTATGAGGATCTAAAGAATGTTCTTGGGCTAACGAGAGCAGATTCAGATAGTAACTCGAATTTGTCAGAGATTGCATCTGCCAGGGGATGTGTTGCTGATGTTGACAACAGGAACTATCCTAATATTTTGAACAGATACCAGTTAGAACACGGTGGTATCAGACAAGCGTCGGGTACATTTTCTGGACAACTATCAGTTAAATTTTCTGAGGGAAGTGGTAGTGATCAAGTTAATTCAGGACCAAATACTCCATCTATGTACGCTGTTGACTCACCTCGTTCATACCATCCTTACGGATCAGAATTCTCAGAAGGTTCTTTCTATAAGAAGATAAAGTTTCTATGTAGCTTTGGAGGTAGAATACTACCAAGACCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCAATCAAGAAGAACATCGCATGGGAGGAACTTATGAGGAAGACTTCGGCTATCTGCAGTCAAACTCACACTATCAAGTACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCCAATGAGGATCTTCATCATATGATTGAGGAGTATGAAGAGCTGGAAAGAGCTGGAGCCTCTCAACGGCTTAGGATTTTTCTCATTCCTTTAAATGAATGTGAGAGTCCAAGTTCCAATGAAGTAAGGGTCAATCAGCAAAGTGATGTAGATTATCATTATGTTGTTGCTGTTAACAGTATGCTGGATCCAAGTCCACGAAATAATTCCAGTGGGCGGAGTTTAGCAAGCCATACTAGCCAATTTGCAAATACCTCTGATTACAACACTCCACGTTTTCACAGAGACTCATTCACATCTGCCTTTGCTTCAGATATGAAAGATTGCACCCCGAACTCTCCAAATTTGGCAGGCCTACTCTCAAAACCCAATCCTCAATGTTTTACAGCCCTAGCTGGCAAGTCATTCAATCAAATGCCTCCTTTATCTCCTGTTTGCGTACAGTCTAAAGATCCCCAAAATTCTAATGCACAGCTATTTATGGATAAACCATATAATGCTATTAATGAAAGCATTACTCCCTTTGTTATGGAAAAAGTTCCACATGACAATACTTTGTATGTAGACAATGTCAATTATGTTGATCCACTTGCGTACTATAACAATCTTTCTCAAGGGCCTAGACACGTGAATTACCATCCTAATAATCAATATATAAGGGAGTCTGACCAGATCAGGAGGCCTGGTGAGAATCTTCATCTTCACAGACATAACAAAAGCAACGAGTTTGTCTCTTCTGCAGTATGTAATCTAAATAATATGAGTTATGAGAGACCTTTAATTACCAATGATGGTTCATATCATTTTAACAAGATTGTCTCTCATCCTCATGAGTCTGCAAGTTTGCTGTCAGAATCTAATCTTAGAGAGGGATCTCGGTATACACTGTTGCATGCACACTCTGACTCAACACTTAATGAGAATGATGAGAACTATAAAGTTCACTTGCAATTTCCCCGCAATATAGAGAGAGACAATTTTCCATCACAAAAAAATTCAAGACATTTAGAAGAATGTTCGTTACAGCCTGGAGAGATAATTGATAGGAAAGAGCACTTGGCTAAGTATCAAAATTTGCCCATTTTTGGAGTGACTGGTAGTTTTAAGAAAGTATCAGAAATTGGTAAAGAGAGCTTGCAACGTGCACAAAAAGACAATGATTTCTTTGATGAAAAGGTTGGAGCTATGTCCCCAGACAATGCCATGGATTTTAAACATTTACAGCACATCTACTCTCCACATGGTGTTTGCCCATCTTCTACAGATTTACAAAGCAGCGAATGCAATGCATCTACCATGTCATTTGTCTCTTTCGAATCCACAAAAAATCTAAGGGGGCAAACACGTGCCCTACCAATAGACAGAACCACTTCTGAGTTTTCCATGAGGAGCCGAAATTCATCAATGCTTCACGAATATGCTATGTCAGTGGCAAAAGACAGTCAACCTCCTTTCCCTGGCTCTTTTAAGTCCCAAACTGACAGAGAATCCTCACTACCTATCTCATATATGGACATGGGTTCTTCCCTAAGAGAGGTTGCTATCCCTGTTGAAGATCCTGCATACTACCTGCACCAAAAGGAAGAAAACAGAATCATTAAGAACCAGTCTTCTGAATATATCAATGAATTTTGCGTCAACAAGCCAGTGTCTGATTCCAAGGGACCAATGGATTATATTTCTTTGGATATCCAATCATGCTTAAAAGTTGTCTCAAATGTAGATGAAAAAGCTGAAGTTGAACCTACATCTTCTAAAAAGGAAGGGATAGAATGTGATAGTCCAGAATCTGAAAGTAAGCATGCAAGGTCTGATAGCGGAAACTTCAACAAGTCTACTGGTGATAGAGCAACTTCTGAAACAGCACCTGAAATTTATGGATTACAGAATATTGAGAATGATGATCTTGAAGAACTGCAAGAGTTGGGATCTGGAACCTTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCTCTGGTCGATTGTCAGAGCAAGAGCGGTTGACTAAGGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCGTTTTATGGGGTAGTTCCAGATGGCCCTGGTGGAACATTGGCAACAGTAACAGAATACATGGTGCATGGATCACTCAGGAATGTTCTCATGAAGAAGGAAAAAGTCCTTGACCGTCGTAAAAGGGTCCTGATCGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTAAGAAATATCGTTCATTTTGATTTAAAGTGTGATAATTTACTTGTCAATCTGGGTGATCCCGAACGACCTGTGTGCAAGGTTGGAGATTTTGGCCTATCCAGAATAAAACGTAATACACTTGTTTCGGGTGGTGTCCGAGGAACCCTTCCATGGATGGCACCTGAATTACTGGATGGTAACAGTTGCAGGGTATCTGAGAAGGTTGATATTTTCTCCTTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAACCATATGCTAACATGCACTGTGGTGCTATCATAGGAGGTATTGTCAATAATACGCTCAGGCCTCCTATTCCAAAACGATGTGATTCCGAATGGAAAAAACTGATGGAAGAGTGCTGGAGTCCTGATCCTGCAGCCAGACCAACCTTCACAGATATTAAAATTAGACTTCGCAACATATCAGCTACACTTCCCAAAAAGAGGCCTAACATCGGCAATCGATGA 3525 0.4043 MNNEDHGISGKLYKDAVSFDFGDNISSVDDGHVCVLTGEEFSAEFLRDRVALRRIPVITDTDLYLPNRLDVNNYQLVYEDLKNVLGLTRADSDSNSNLSEIASARGCVADVDNRNYPNILNRYQLEHGGIRQASGTFSGQLSVKFSEGSGSDQVNSGPNTPSMYAVDSPRSYHPYGSEFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIKKNIAWEELMRKTSAICSQTHTIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGASQRLRIFLIPLNECESPSSNEVRVNQQSDVDYHYVVAVNSMLDPSPRNNSSGRSLASHTSQFANTSDYNTPRFHRDSFTSAFASDMKDCTPNSPNLAGLLSKPNPQCFTALAGKSFNQMPPLSPVCVQSKDPQNSNAQLFMDKPYNAINESITPFVMEKVPHDNTLYVDNVNYVDPLAYYNNLSQGPRHVNYHPNNQYIRESDQIRRPGENLHLHRHNKSNEFVSSAVCNLNNMSYERPLITNDGSYHFNKIVSHPHESASLLSESNLREGSRYTLLHAHSDSTLNENDENYKVHLQFPRNIERDNFPSQKNSRHLEECSLQPGEIIDRKEHLAKYQNLPIFGVTGSFKKVSEIGKESLQRAQKDNDFFDEKVGAMSPDNAMDFKHLQHIYSPHGVCPSSTDLQSSECNASTMSFVSFESTKNLRGQTRALPIDRTTSEFSMRSRNSSMLHEYAMSVAKDSQPPFPGSFKSQTDRESSLPISYMDMGSSLREVAIPVEDPAYYLHQKEENRIIKNQSSEYINEFCVNKPVSDSKGPMDYISLDIQSCLKVVSNVDEKAEVEPTSSKKEGIECDSPESESKHARSDSGNFNKSTGDRATSETAPEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLMKKEKVLDRRKRVLIAMDAAFGMEYLHLRNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTDIKIRLRNISATLPKKRPNIGNR* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01670 1174 Gene3D - 206 288 - -
Lapu7g01670 1174 Gene3D Transferase(Phosphotransferase) domain 1 982 1171 - -
Lapu7g01670 1174 Gene3D Phosphorylase Kinase; domain 1 887 981 - -
Lapu7g01670 1174 Pfam PB1 domain 203 286 IPR000270 GO:0005515
Lapu7g01670 1174 Pfam Protein tyrosine and serine/threonine kinase 896 1154 IPR001245 GO:0004672|GO:0006468
Lapu7g01670 1174 CDD STKc_MAP3K-like 900 1153 - -
Lapu7g01670 1174 MobiDBLite consensus disorder prediction 146 165 - -
Lapu7g01670 1174 MobiDBLite consensus disorder prediction 864 884 - -
Lapu7g01670 1174 SUPERFAMILY Protein kinase-like (PK-like) 881 1154 IPR011009 -
Lapu7g01670 1174 MobiDBLite consensus disorder prediction 835 888 - -
Lapu7g01670 1174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1019 1031 IPR008271 GO:0004672|GO:0006468
Lapu7g01670 1174 CDD PB1_UP2 191 287 - -
Lapu7g01670 1174 MobiDBLite consensus disorder prediction 835 863 - -
Lapu7g01670 1174 ProSitePatterns Protein kinases ATP-binding region signature. 900 921 IPR017441 GO:0005524
Lapu7g01670 1174 SMART PB1_new 202 289 IPR000270 GO:0005515
Lapu7g01670 1174 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 887 981 - -
Lapu7g01670 1174 ProSiteProfiles Protein kinase domain profile. 894 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01670 1174 SUPERFAMILY CAD & PB1 domains 203 292 - -
Lapu7g01670 1174 PRINTS Tyrosine kinase catalytic domain signature 1128 1150 IPR001245 GO:0004672|GO:0006468
Lapu7g01670 1174 PRINTS Tyrosine kinase catalytic domain signature 1084 1106 IPR001245 GO:0004672|GO:0006468
Lapu7g01670 1174 PRINTS Tyrosine kinase catalytic domain signature 976 989 IPR001245 GO:0004672|GO:0006468
Lapu7g01670 1174 PRINTS Tyrosine kinase catalytic domain signature 1013 1031 IPR001245 GO:0004672|GO:0006468
Lapu7g01670 1174 SMART serkin_6 894 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g01670 1174 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 207 289 - -
Lapu7g01670 1174 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 982 1172 - -
Lapu7g01670 1174 PANTHER SERINE-THREONINE PROTEIN KINASE 254 1157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01670 Lapu-Chr7 32306905 32312897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01670 32 338 MAP Kinase Kinase Kinase AT1G16270 39.873 2.24e-42 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lapu7g01670 PK_Tyr_Ser-Thr 2.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01670 - - gmx:100810711 1909.03