Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01664 ATGTTGGATGCGCCAGCGAGCCCGAGTCACGAGAGTGGGAGCGAACAGAGCCCGCGCGGTTCCTCGTCTGGTGCGAGGGAGCACGACCGCTACCTTCCTATTGCCAACATCAGCCGCATCATGAAGAAGGGTCTGCCTCCCAACGGAAAGATTGCTAAGGACGCCAAAGATAGTATGCAAGAATGTGTTTCTGAGTTCATCAGCTTCATCACCAGCGAGGCTAGTGAGAAATGTCAGAAAGAGAAGAGAAAGACTATTAATGGAGACGATTTATTATGGGCAATGGCCACTTTAGGTTTTGAAGACTATATAGAGCCGCTTAAGGTGTACCTGGCAAGCTACAGAGAGGCGGAGGGTGACACCAAAGGATCTGCTAGAGGTGGTGATGGATCTGCTAGACCAGATCAAGTTGGCCTTGCAGGTCAAAATTCTCAGCTTGTTCATCAGGGTTCACTGAACTATATTAGTTTGCAGCAAACACTTGCAAGCCCAATTATGGACATAGAAAAATAG 513 0.4854 MLDAPASPSHESGSEQSPRGSSSGAREHDRYLPIANISRIMKKGLPPNGKIAKDAKDSMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLASYREAEGDTKGSARGGDGSARPDQVGLAGQNSQLVHQGSLNYISLQQTLASPIMDIEK* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01664 170 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 136 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lapu7g01664 170 FunFam Nuclear factor Y, subunit B1 21 119 - -
Lapu7g01664 170 SUPERFAMILY Histone-fold 29 143 IPR009072 GO:0046982
Lapu7g01664 170 Gene3D Histone, subunit A 18 153 IPR009072 GO:0046982
Lapu7g01664 170 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Lapu7g01664 170 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Lapu7g01664 170 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Lapu7g01664 170 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Lapu7g01664 170 MobiDBLite consensus disorder prediction 1 29 - -
Lapu7g01664 170 MobiDBLite consensus disorder prediction 120 142 - -
Lapu7g01664 170 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01664 Lapu-Chr7 32235316 32240538 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01664 9 165 CCAAT-HAP3 Transcription Factor Family AT2G37060 71.519 7.49e-77 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lapu7g01664 CBFD_NFYB_HMF 5.7e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01664 K08065 - gmx:100779577 292.352