Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01659 ATGGAGCAGGAGGAGCACGAAGTATATGGTGCGGACATTCCCGACGAGGAGGTTGACATGGACGCCGACGCCGAACAACAGGACGACCAACTTCCCTCCAATCACACAACCAAGGAATTGGAGGACATGAAGAAGAGGCTGAAGGAGATCGAGGAAGAAGCCAGCGCTCTTCGCGAAATGCAGGCCAAGGTTGAGAAAGAGATGGGCGCTGTTCAAGATTCGTCAGGTCCATCTGCAACTCAAGCTGAAAAGGAGGAAGTGGATGCTCGGTCAATCTATGTTGGTAATGTTGACTATGCATGTACACCTGAAGAAGTTCAGCAGCATTTTCAGTCCTGTGGAACTGTGAACAGGGTGACAATACTGACAGACAAATTTGGTCAGCCAAAAGGGTTTGCTTATGTAGAATTTGTTGAGATTGACGCTGTTCAGAATGCTCTCCTGCTAAATGAATCAGAATTGCATGGTCGACAACTGAAGGTGTCGGCCAAGCGGACAAATGTTCCTGGAATGAAGCAGTATTATGGAAGAAGACCAACTGGTTTCCGATCTAGGAGGCCTTTCATGCCTGCTCCATTCTTTCCACCATATAGTTATGGGTGTCGTTATCTTTTTCTTTATGTTCCGTGA 630 0.473 MEQEEHEVYGADIPDEEVDMDADAEQQDDQLPSNHTTKELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGPSATQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYYGRRPTGFRSRRPFMPAPFFPPYSYGCRYLFLYVP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01659 209 MobiDBLite consensus disorder prediction 1 26 - -
Lapu7g01659 209 FunFam Polyadenylate-binding protein 1 84 170 - -
Lapu7g01659 209 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 90 166 IPR000504 GO:0003723
Lapu7g01659 209 SMART rrm1_1 91 162 IPR000504 GO:0003723
Lapu7g01659 209 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 92 160 IPR000504 GO:0003723
Lapu7g01659 209 Gene3D - 12 172 IPR012677 -
Lapu7g01659 209 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 22 185 - -
Lapu7g01659 209 MobiDBLite consensus disorder prediction 1 45 - -
Lapu7g01659 209 CDD RRM_II_PABPs 91 162 - -
Lapu7g01659 209 Coils Coil 33 67 - -
Lapu7g01659 209 SUPERFAMILY RNA-binding domain, RBD 78 187 IPR035979 GO:0003676
Lapu7g01659 209 MobiDBLite consensus disorder prediction 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01659 Lapu-Chr7 32162200 32167121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01659 91 162 Eukaryotic Initiation Factors Gene Family AT2G36660 38.158 6.00e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01659 K14396 - gmx:100527545 362.459