Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01655 ATGTATTGGGGGGTTATGGCAGGAAACATGGGGTGGGGTGTGATAGAGGAGGAGGGATGGAGGAAGGGTCCTTGGACTGCTGAAGAGGACAGATTGCTCATTCAGTATGTCAGGTTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGGACTGAAAAGAAATGGAAAGAGCTGCAGACTGAGATGGGTGAATTACCTGAGACCTGACCTCAAGAAGGGTCAGATAACACCACAAGAAGAAAGCATAATTCAAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATCAAGAATTATTGGAGGACCCATTTCAAGAAAAAGACTAAAAGCCCCTCTGATGCTGCTGAGAAAGCTAGAATCCGTTCCTCAAGGAGGCAGCAATTTCAACAGCAGCAACTGCAGTTGAAGCATCAGCAGCAGGTTCAGCAGCAGCAACAACAATTCCAATTCAACTTGGACATAAAAGGGATCATAAACTTGCTTGAAGAAAATGACCATAGAGTCCCTTCTACATCTCAAGAGACGCAAGAAATGGTTAACATGTATCCAAATACTTCAGAGCAGCAGGGTTACTTCTACTCTATGTTCAATGTCAATGACAATGTCTCAGCACCAGAGTCCTCAAATGAAGAAATCCTGTGGGATGGACTGTGGAACTTGGACGATGTTCTTTGCAATTTCAATGCAGCAAGTGCTACAAGCAAAGCTAGTTTACACAATTTAGTCTCTCCTTTCAGTTAA 789 0.4449 MYWGVMAGNMGWGVIEEEGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPSDAAEKARIRSSRRQQFQQQQLQLKHQQQVQQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMVNMYPNTSEQQGYFYSMFNVNDNVSAPESSNEEILWDGLWNLDDVLCNFNAASATSKASLHNLVSPFS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01655 262 Gene3D - 79 123 - -
Lapu7g01655 262 CDD SANT 24 69 IPR001005 -
Lapu7g01655 262 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Lapu7g01655 262 Gene3D - 22 74 - -
Lapu7g01655 262 SMART sant 74 122 IPR001005 -
Lapu7g01655 262 SMART sant 21 71 IPR001005 -
Lapu7g01655 262 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 235 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lapu7g01655 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Lapu7g01655 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Lapu7g01655 262 CDD SANT 79 120 IPR001005 -
Lapu7g01655 262 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Lapu7g01655 262 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Lapu7g01655 262 FunFam Myb transcription factor 22 74 - -
Lapu7g01655 262 FunFam MYB-related transcription factor 79 123 - -
Lapu7g01655 262 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Lapu7g01655 262 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01655 Lapu-Chr7 32136096 32137276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01655 17 262 MYB Transcription Factor Family AT3G24310 56.343 1.49e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu7g01655 Myb_DNA-binding 8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01655 K09422 - gmx:100813935 455.677