Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01643 ATGCTTAGATTGTGTTTATATCACTTGCTGCAGGATGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTCGAACTTTGTAACGCTGATTTTTTCCCAGAGGCTTTGCCAAATTCTGAGGTTACTTCCAGCTCAAACTGTTGCTATGAGGAGAACTCCTCGTATGCCACAACAAACATATCTTTAACTGCAGATGTAGAAAATAAATTGAATAGCAATAGCAACACAGTCACCACGCCAACTAGCACCACCACCACCAACAACAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCTCACTATCTCCCTCTTTCAATGTTCCCCCATTTATCCCAGTCACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAGCCTCAGGTCCAATTACCAGCATGTTCAGTTGTGGAAGGCTTCTCTCAGTATCCCACTGACCCCGTTGCACCTGCCCTTATGGGGGCTCCATTACCTTCTGTTTTTGAAGAGGATTGCATATCTTCTGTCCCTTCTTATGTGCCTCTCAACCCTTCATCTCCTTGCACTTATCTCAGTCCTGGCATGCCACCATACATGCCTCCTGGCCCCCTTACTAGTGCCTTATCAACTGATAGTTCTGGATATTTTGGTGGGAACATTCTTCTTGGTTCTGAACTTCAGACACAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATTCAGCGGGTGTTTAACCCTCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGCAACTAGTTCCCGGGGGTGGTAGTTCTGCCACTCTAACACCTGAAATCTCAAACTTAGAGGACTCCTCATTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGAAAAACTCTGGCAGATAGCCGACCTCGGGTTCGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAAACCAATAGAACTACTAGTAGCAATCATGAAGATGATGACGAAGAAGAAGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATATTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1218 0.4261 MLRLCLYHLLQDEISSPLSARIFELCNADFFPEALPNSEVTSSSNCCYEENSSYATTNISLTADVENKLNSNSNTVTTPTSTTTTNNNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFIPVTSQQEQFDFSSVQPQVQLPACSVVEGFSQYPTDPVAPALMGAPLPSVFEEDCISSVPSYVPLNPSSPCTYLSPGMPPYMPPGPLTSALSTDSSGYFGGNILLGSELQTQELEYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLVPGGGSSATLTPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEDDDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01643 405 MobiDBLite consensus disorder prediction 342 364 - -
Lapu7g01643 405 ProSiteProfiles CCT domain profile. 307 349 IPR010402 GO:0005515
Lapu7g01643 405 MobiDBLite consensus disorder prediction 70 93 - -
Lapu7g01643 405 Pfam CCT motif 307 349 IPR010402 GO:0005515
Lapu7g01643 405 MobiDBLite consensus disorder prediction 342 371 - -
Lapu7g01643 405 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 88 366 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01643 Lapu-Chr7 32051955 32058660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01643 277 356 C2C2-CO-like Transcription Factor Family AT5G24930 38.824 3.51e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu7g01643 CCT 3.4e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01643 - - gmx:100813806 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01643 7 32051955 32058660 Lapu7g01643 7 32051955 32058660 ECH