Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01610 ATGGAGGAGAACCAGAAGGGGAAGCAGGGCAAGGAAGAAGTGCGGTACCGTGGTGTGCGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAAATAAGGGATCCATCAAAGCAAGGGTCGAGGCTGTGGTTGGGGACATTTGATACTGCTGAAGAAGCTGCTAGAGCTTATGATCGCGCAGCTTTTAACTTGAGGGGTCATCTTGCCATTCTCAATTTTCCCAGTGAGTATTATTCTCAAATAAGGGGTTCACCACCTTATCCACCTCATTTAGCACCACCCTCTTCTTGCTCATCGCATGCTACTGGAAGCACTTCTTCTTCTTTTGCACATCATAGGCCTGTTTTCGAGATTCCTTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCAGTCAGAGGAACACAAGAAGAAAAAGAAGGGAGAATAG 429 0.4895 MEENQKGKQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLAPPSSCSSHATGSTSSSFAHHRPVFEIPCLDDKVLEDLLGQSEEHKKKKKGE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01610 142 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Lapu7g01610 142 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Lapu7g01610 142 FunFam Ethylene-responsive transcription factor 2 14 75 - -
Lapu7g01610 142 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Lapu7g01610 142 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Lapu7g01610 142 MobiDBLite consensus disorder prediction 83 107 - -
Lapu7g01610 142 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Lapu7g01610 142 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Lapu7g01610 142 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Lapu7g01610 142 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Lapu7g01610 142 PANTHER DNA-BINDING DOMAIN 7 111 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01610 Lapu-Chr7 31698979 31699663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01610 13 137 AP2-EREBP Transcription Factor Family AT3G23230 66.400 2.51e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01610 AP2 5.4e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01610 - - gmx:100793703 212.231