Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01609 ATGGATATGGATTCATCCTCCTTCTTCAACTCGTCCTCTTCTGATTTCTCCTCCGAATCTTCCTCTCCGGAGGCCTTCTCCTGGGAGGGCTACCTCCCCTTCAACGAGAACGACCCGGAGGAGATGCTCCTCTACGGCATGATCGCGGGCGCCACCACAGCCGATCGCGCCGCCGACAGCGCGGGATCCGAGGAGAGTGCGGCGGTGCAGAAGGAGAAGTCCTACCGCGGAGTGCGGCGGCGGCCATGGGGGAAGTTTGCGGCGGAGATCAGGGACTCCACACGGCACGGGATGAGGGTGTGGCTTGGGACATTCGACAGCGCTGAAGCCGCGGCTTTGGCTTACGACCAAGCCGCGTTTTCCATGCGAGGCTCCGCTGCGATTCTGAACTTCCCCGTTGAGATCGTTAGAGAATCGCTTAGGGAGATGAACCAGGCGCTGGACAGCAATGAAGAAGGGTGCTCCCCTGTTGTCGCTCTCAAGAGGAAACACTCCTTAAGGAGGAAAATTGGTGTGAAGAAAAACAACAAACAGAGTAGCGTAGACAATGCGGTCGTGTTTGAAGACCTTGGTCCTGACTACTTGGAACAGTTGTTGATGTCCTCAGATCATATTCCTTCCTCCTTCTGA 630 0.5651 MDMDSSSFFNSSSSDFSSESSSPEAFSWEGYLPFNENDPEEMLLYGMIAGATTADRAADSAGSEESAAVQKEKSYRGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEIVRESLREMNQALDSNEEGCSPVVALKRKHSLRRKIGVKKNNKQSSVDNAVVFEDLGPDYLEQLLMSSDHIPSSF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01609 209 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Lapu7g01609 209 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Lapu7g01609 209 CDD AP2 73 133 IPR001471 GO:0003700|GO:0006355
Lapu7g01609 209 Gene3D AP2/ERF domain 73 134 IPR036955 GO:0003700|GO:0006355
Lapu7g01609 209 PANTHER DNA-BINDING DOMAIN 24 200 IPR044808 GO:0003700|GO:0009873
Lapu7g01609 209 MobiDBLite consensus disorder prediction 1 32 - -
Lapu7g01609 209 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Lapu7g01609 209 MobiDBLite consensus disorder prediction 1 25 - -
Lapu7g01609 209 SUPERFAMILY DNA-binding domain 74 134 IPR016177 GO:0003677
Lapu7g01609 209 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
Lapu7g01609 209 Pfam AP2 domain 74 124 IPR001471 GO:0003700|GO:0006355
Lapu7g01609 209 FunFam Ethylene-responsive transcription factor 2 73 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01609 Lapu-Chr7 31667637 31668699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01609 32 204 AP2-EREBP Transcription Factor Family AT3G23240 60.989 8.01e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g01609 AP2 6.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01609 K14516 - gmx:100790598 320.087