Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01608 ATGTCAGAGGCAGACCTGGCAAGCAGGTGCAACTTTCTGAGCCTGAAATCAAGCAGCTCTGTCTTGTCTCCAGGGATATCTTCTCCAACCAGCCCAACCTCTTGGAACTCGAGGCACCACTTAAGATCTGTGGCTTTGTTATTGTTGTTGATAATGTTGTTGATAAGTATGATTTACCCACATGGAGAGGCTATTGACCTCAATGTTTTTCACGCACTTCAACTAAAAAACCAGTATGGAGATATACATGGTCAATATTCTGACCTTCTGCGACTTTTTGAGTATGGTGGATTGCCTCCTCGTTCTAATTACTTGTTTTTAGGGGACTATGTTGATCGTGGGAAGCAAAGCTTGGAGACTATATGTCTCCTTCTTGCTTATAAAATAAAATATCCCAATAACTTTTTCCTTCTGAGGGGCAACCATGAATGTGCTTCTATAAACCGCATCTATGGATTTTATGATGAGTGTAAACGAAGATTCAACGTGAGGCTTTGGAAAGTGTTCACAGAATGTTTCAACTGCTTGCCAGTGGCAGCTCTAATTGATGAAAAGATACTCTGCATGCATGGTGGACTCTCTCCTGAGTTACACAACTTAAATCAGATAAAGAGTTTGCCGCGTCCTACTGAAGTACCTGAAACAGGTCTACTATGTGACCTCCTTTGGTCTGATCCTAGCAGTGACATTCGGGGTTGGGGAGAAAATGAACGTGGAGTGTCCTATACTTTTGGTGCTGACAGGGTGACAGAATTCCTTCAGAAGCATGATCTAGATTTGATTTGCAGGGCACATCAGGTTGTGGAAGACGGATATGAGTTCTTTGCTGACAGACAACTTGTAACTATCTTCTCCGCACCTAATTACTGTGGAGAGTTTGACAATGCTGGTGCTATGATGACTGTTGATGAGTCACTTGTGTGCTCTTTTCAAATATTGAAGCCTGTAGAAAAAAAGCCTAGTAAGTTTGGCTTTGGGAGCACAACTACAGTTAAGAATAGTAGTACTCCAGCAAAAGCCAAGGTATTTTGA 1032 0.4205 MSEADLASRCNFLSLKSSSSVLSPGISSPTSPTSWNSRHHLRSVALLLLLIMLLISMIYPHGEAIDLNVFHALQLKNQYGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPNNFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTECFNCLPVAALIDEKILCMHGGLSPELHNLNQIKSLPRPTEVPETGLLCDLLWSDPSSDIRGWGENERGVSYTFGADRVTEFLQKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMTVDESLVCSFQILKPVEKKPSKFGFGSTTTVKNSSTPAKAKVF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01608 343 ProSitePatterns Serine/threonine specific protein phosphatases signature. 138 143 IPR006186 GO:0016787
Lapu7g01608 343 SUPERFAMILY Metallo-dependent phosphatases 80 320 IPR029052 -
Lapu7g01608 343 SMART pp2a_7 42 317 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 200 227 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 257 277 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 104 131 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 137 161 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 75 102 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 279 295 IPR006186 GO:0016787
Lapu7g01608 343 PRINTS Serine/threonine phosphatase family signature 171 197 IPR006186 GO:0016787
Lapu7g01608 343 FunFam Serine/threonine-protein phosphatase 57 327 - -
Lapu7g01608 343 Gene3D - 77 325 IPR029052 -
Lapu7g01608 343 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 79 320 - -
Lapu7g01608 343 Pfam Calcineurin-like phosphoesterase 79 267 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01608 Lapu-Chr7 31640681 31645785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01608 80 260 Calmodulin-binding Proteins AT5G63870 35.023 1.41e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01608 K06269 - gmx:100803420 523.472