Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01588 ATGTTGTTGTATGATGATGTTTCAGGAAAGTACCGAGTGGAATGTTTCAGTATGAGAGCTAAGAGTTTGATAAGTAAAAAGCAGATTAGCCTAAGATTGAGAAAAATGATTAAGTGTATATGCTCTGGAGAGCAGTTAAAGGTAGATGAATTAGGTTACTCATCGGAGTCCCTAGCAACCAGAGATTATTCAGCTAGTGGTGGCTTTTCATCTCGACCTGGTGAAAACGATACAAAGGTTGACAATACCAACATTGAAGAAGCAGAGTCGTCTCTCCGTGAAAGTGGTTATTTAAATTATGAGGAAGCTAGAGCCTTGCTAGGAAGACTTGAGTATCAGAAGGGCAATGTCGAAGCTGCACTTCATGTGTTTGAAGGAATAGATATTGCTACTGTCGTTCCCAAGATGAAAGTTTCTATATCCAGAAGATGTGAACCTAATACACGCCGTTCGCAAAGTGATGCTCAGCCTCCTATGTCAATGCATGCTGTTAGTTTACTTCTTGAAGCTGTCTTTCTCAAGGCTAAATCGTTGCAGGCTCTTAGAAGGTTTCAAGATGCTGCTCAGTCATGCAAGACAATTTTAGACACTGTTGAATCAGCTTTACCAGAAGGCTGGCCTGAACACTTTGTTTCAGACTGTAAACTGCAAGAGACAGTGTCAAATGCTGTGGAACTGCTTCCGGAGTTGTGGAAGCTTGCAGGCTGTCCTCAAGATGTCATCTCATCGTTTAGAAGGGCCCTGCTTTATCATTGGAATCTTGGCATTGAAACCACTGCAAGAATACAAAAGGAATTTGCTTTTTTTCTTCTGTACAGTGGTTGTGAAGCTAGCCCTCCTGCTCTCCGCTCTCAGTTGGATGGTTCCTTTGTGCCAAGGAACAACTTAGAAGAGGCTGTTCTTCTGCTTCTGATTTTGCTTAGAAAATGTATTCTTGGATACATTGTATGGGACCCTTCATTAATTGATCACCTTTCTTATGCTCTAAGTGTTTCTGGGGAATGCATGACTCTAGCTCAACAGGTTGAGGAATTGCTTCCTGAAAACATAGACAGAAAAGACAGATACTACACTCTAGCTCTTTCTTACTGTGGAGAAGGTGAACATACGACTGCTTTAGATCTTCTGAGGAACTCTTTGAATCATAGAGAGAACTCAGACTGCGTAAAGGAGTTGGTTCTAGCTTCAAAAATTTGTGCAGACAAGAAGTTTTGCACTGAAGAAGGAATCAAATATTCTTCCAGAGCCATTTCTCAGTTGAATGGAAAGTGCATGCAGATGGTAGCTATTGCAAATTGCTTGCTAGGTGTTCTACTGTCGTCAAAATCCAGGTCAGCTGCTTCTGAATCAGAGAAGGTTTTTTTGCAGTCTGAAGCACTCAGTGCTCTAAAAGTTTCTGAGAGAACGATGAGGGAAAGTGATCCGTACATTGTCCTTCATCTTTGTCTAGAATATGCTGAACAGAGGAAGTTAAGCATTGCTGTTGATCATGCAAAGAAACTGATTAAGCTTGAGGGTGGATCTAGTGTTAGTGGATATATTCTACTAGCACGGATTTTATCTGCTCAACAGAAGTTTGAAGATGCCGAGCTTGTTATAGATGCTGCTCTAGATCAAAGTGGGAAATGGGATCAAGGAGAATTGTTGAGAACTAAGGCTAAACTACGGATTGCACAGGGAAAATTAAAGAATGCAGTGGATACATATACTTTTCTTCTCGCGGTTCTTCAGGTCCAAAATAAAAGTTTAGGCACGGCAAGTAAGGTTAGCAAGGGAAACCGTGACAGAAGACTGGAAATGGAAATATGGCATGATTTAGCCAATGTGTACACTGCCTTATCACAGTGGCAGGATGCTGAAGTTTGTCTAGCAAAATCTGAGGCTATTAATCCCTATTCTGCTTCTAGATGGCACACAAAGGGTTTACTTTTTGAAGCCAGAGGTCTTCATCAAGAGGCTCTGAAATCATTTAGAAAAGCATTGGATATTGAGCCCAACCATGTGCCAAGTTTGATATCCACTGCCTGTGTACTCAGACAACTCGGTGGTCAATCATCTTCAATAGTTAGAAGCCTTCTCACCGATGCATTACGCCTTGACAGAACAAACCCATCTGCTTGGTACAATCTTGGACTGTTCTACAGAGCTGATTTGGGGACATCAGCAATGGAAGCTGTTGAATGCTTTGAAGCAGCAGCTTTTCTGGAAGAATCTTCTCCCATTGAACCCTTCAGATAA 2238 0.4155 MLLYDDVSGKYRVECFSMRAKSLISKKQISLRLRKMIKCICSGEQLKVDELGYSSESLATRDYSASGGFSSRPGENDTKVDNTNIEEAESSLRESGYLNYEEARALLGRLEYQKGNVEAALHVFEGIDIATVVPKMKVSISRRCEPNTRRSQSDAQPPMSMHAVSLLLEAVFLKAKSLQALRRFQDAAQSCKTILDTVESALPEGWPEHFVSDCKLQETVSNAVELLPELWKLAGCPQDVISSFRRALLYHWNLGIETTARIQKEFAFFLLYSGCEASPPALRSQLDGSFVPRNNLEEAVLLLLILLRKCILGYIVWDPSLIDHLSYALSVSGECMTLAQQVEELLPENIDRKDRYYTLALSYCGEGEHTTALDLLRNSLNHRENSDCVKELVLASKICADKKFCTEEGIKYSSRAISQLNGKCMQMVAIANCLLGVLLSSKSRSAASESEKVFLQSEALSALKVSERTMRESDPYIVLHLCLEYAEQRKLSIAVDHAKKLIKLEGGSSVSGYILLARILSAQQKFEDAELVIDAALDQSGKWDQGELLRTKAKLRIAQGKLKNAVDTYTFLLAVLQVQNKSLGTASKVSKGNRDRRLEMEIWHDLANVYTALSQWQDAEVCLAKSEAINPYSASRWHTKGLLFEARGLHQEALKSFRKALDIEPNHVPSLISTACVLRQLGGQSSSIVRSLLTDALRLDRTNPSAWYNLGLFYRADLGTSAMEAVECFEAAAFLEESSPIEPFR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01588 745 Pfam Tetratricopeptide repeat 635 667 IPR019734 GO:0005515
Lapu7g01588 745 SUPERFAMILY TPR-like 547 715 IPR011990 GO:0005515
Lapu7g01588 745 Gene3D Tetratricopeptide repeat domain 582 742 IPR011990 GO:0005515
Lapu7g01588 745 ProSiteProfiles TPR repeat profile. 634 667 IPR019734 GO:0005515
Lapu7g01588 745 SMART tpr_5 353 386 IPR019734 GO:0005515
Lapu7g01588 745 SMART tpr_5 634 667 IPR019734 GO:0005515
Lapu7g01588 745 SMART tpr_5 510 543 IPR019734 GO:0005515
Lapu7g01588 745 SMART tpr_5 600 633 IPR019734 GO:0005515
Lapu7g01588 745 SMART tpr_5 168 201 IPR019734 GO:0005515
Lapu7g01588 745 SUPERFAMILY TPR-like 343 569 IPR011990 GO:0005515
Lapu7g01588 745 PANTHER PROTEIN NPG1 37 745 IPR043376 -
Lapu7g01588 745 Gene3D Tetratricopeptide repeat domain 81 581 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01588 Lapu-Chr7 31416915 31422048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01588 33 745 Calmodulin-binding Proteins AT4G28600 52.949 0.0 714
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01588 7 31416915 31422048 Lapu7g01588 7 31416915 31422048 ECH