Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01575 ATGGGCTTCTATCTTAATCTCAAATTCAAGGCGTTTCGGCTGAAACGGTTTCTGCTAGGACGCAGAGGCAGAAAAAGAAAGGATAAGGTGGCAAAGAAGCCTTCATGGATGATGCCAATGACATACGGTTATCATGTGGTTGAACATAATATGAGCAGAGATGAGTCTGATAACTCAGACTTTGATTTGGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAATTGTGGTATTTTGGAATCTTTGATGCACTAATTGGAGACAGGGTTAGCAAGTGCATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGACTCGTATAAGTAGTAAAAGTAAAGAAGCTCTAAGAAGAGCTTACCTTAATGTAAAAGCAAAGATCAGAGAGGAACACAAATTAGATGAGACATACAGAATGGGTTCAGCATCTGTTATGTTAATCAATGGAGAGAAACTTGTAGTAGCCAACATGGGGGATTACAGAACTGTTGTGTGCAGAGATGGCATAGCTCATCAGATAACAAGACAATTAGAGAAAATACACTGGTCTCACAGACTCTTTTCAGGATTCATGCTAGTATGTCAATCAGGAAATGCAACAGGTGCTAAACATTCTAGAGGCTCTGATGTTGTCGTAAAAAGTGAAGTGCTTGATTCTGGAACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTAATGAAAAATCAAGAGGCTGTGAATCTGATCAGTCACATAGAAGATCCCCATGAAGCAGCTGAGTGCTTGGCAAAGGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGATTTGATTGA 837 0.3943 MGFYLNLKFKAFRLKRFLLGRRGRKRKDKVAKKPSWMMPMTYGYHVVEHNMSRDESDNSDFDLVVAQREEMNQTELWYFGIFDALIGDRVSKCMQSHFFDKKLQETRISSKSKEALRRAYLNVKAKIREEHKLDETYRMGSASVMLINGEKLVVANMGDYRTVVCRDGIAHQITRQLEKIHWSHRLFSGFMLVCQSGNATGAKHSRGSDVVVKSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPHEAAECLAKEALIRMTKSNISCLIIRFD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01575 278 Gene3D - 27 186 IPR036457 -
Lapu7g01575 278 Pfam Protein phosphatase 2C 49 175 IPR001932 -
Lapu7g01575 278 Pfam Protein phosphatase 2C 217 270 IPR001932 -
Lapu7g01575 278 SMART PP2C_4 30 275 IPR001932 -
Lapu7g01575 278 PANTHER PROTEIN PHOSPHATASE 34 276 IPR015655 GO:0004722|GO:0006470
Lapu7g01575 278 ProSiteProfiles PPM-type phosphatase domain profile. 58 277 IPR001932 -
Lapu7g01575 278 CDD PP2Cc 62 277 IPR001932 -
Lapu7g01575 278 Gene3D - 207 278 IPR036457 -
Lapu7g01575 278 SUPERFAMILY PP2C-like 38 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01575 Lapu-Chr7 31281619 31283604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01575 1 277 PP2C-type Phosphatase Gene Family AT3G23360 46.099 1.73e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01575 K19704 - gmx:100785227 399.823