Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01557 ATGGCAACTATGCTGGGAAAGGAGCATGGTCTGAACCTCAAGGAGACTGAGCTTTGCCTCGGTCTGCCTGGTGCTGGCGGTGGTGGTGCTGGCGGTGGCGGTGGCTCTGAGGTGGAAACACCAAGGGCCTCTGGGAAGAGAGGATTCTCTGAGACAGTTGATCTGAAGCTTAATCTCCAGGCCAAGGAAGATCTCAACGAGAATCTGAAGAATGCCTCAGAGGAGAAGACCATCCTTAAGGATCCTACCAAGCAACCGGCTAAGGCTCAAGTGGTTGGTTGGCCACCAGTGAGGTCATACAGAAAGAACATGATGACTCAGAAAGTTAACACTGAAGATGGAACTGAGAAAACAACAAACAGCACTACTTCTGGGGCATTTGTCAAAGTTTCCATGGATGGAGCACCTTACCTTCGTAAGGTGGACCTCACAATGTACAAAAGTTACAAAGAATTATCTGATGCCTTGGCCAAAATGTTCAGTTCTTTCACCATGGGCAATTATGGGGCCCAGGGAATGATAGACTTCATGAATGAACGCAAGTTGATGGATCTTCTTAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGCGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAGGCAATTGGACTTGCGCCAAGAGCAATGGAAAAATGCAAAAGCAGAAGCTGA 732 0.4795 MATMLGKEHGLNLKETELCLGLPGAGGGGAGGGGGSEVETPRASGKRGFSETVDLKLNLQAKEDLNENLKNASEEKTILKDPTKQPAKAQVVGWPPVRSYRKNMMTQKVNTEDGTEKTTNSTTSGAFVKVSMDGAPYLRKVDLTMYKSYKELSDALAKMFSSFTMGNYGAQGMIDFMNERKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01557 243 MobiDBLite consensus disorder prediction 26 49 - -
Lapu7g01557 243 Gene3D - 119 237 - -
Lapu7g01557 243 Coils Coil 52 75 - -
Lapu7g01557 243 ProSiteProfiles PB1 domain profile. 125 225 IPR000270 GO:0005515
Lapu7g01557 243 FunFam Auxin-responsive protein 120 235 - -
Lapu7g01557 243 Pfam AUX/IAA family 43 234 IPR033389 -
Lapu7g01557 243 SUPERFAMILY CAD & PB1 domains 121 224 - -
Lapu7g01557 243 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 230 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01557 Lapu-Chr7 31056261 31059202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01557 123 228 B3 DNA Binding Superfamily AT3G61830 34.906 1.03e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lapu7g01557 AUX_IAA 6e-83 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01557 K14484 - gmx:100810762 412.92