Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01556 ATGGAAAGCACTGTGACCTTTGAGACTGATCTCAACCTCAAGGCAACTGAGCTTAGATTGGGGCTCCCAGGAACCGAAGAAAGTGAGGAAAAAACACTGCCTGCACCTGTTAGAATTACCAACAAAAGGCCATTGACTGAAACTTCTGAGGAGACTGTTTCTAAGGGCCCTACTGCTCAAAATGTCGAAACTGAGGCTGCCCCTCCTGCCAAGGCAAAGATAGTGGGGTGGCCACCAATCAGATCCTATAGGAAAAACAGCCTTCAGGAGAATGATGGTGCTGGGATTTATGTCAAAGTAAGCATGGATGGAGCACCTTACCTGAGGAAGATTGACTTGAAGGTATATGGAGGCTACACACAACTTCTCAAAGCTCTAGAAAACATGTTCAAGTTGACCATAGGTGAGTACTCTGAAAAAGAAGGTTACAAGGGATCTGACTATGCACCAACATATGAAGACAAGGACGGTGACTGGATGTTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTGAGAATCATGAAAGGATCAGAGGCCAGGGTGTATGCTGTTTGTTGGCTGGCATACCTAATATGGAATTATAACTCTGAAGCAGGAGATGGAAGATAG 627 0.4514 MESTVTFETDLNLKATELRLGLPGTEESEEKTLPAPVRITNKRPLTETSEETVSKGPTAQNVETEAAPPAKAKIVGWPPIRSYRKNSLQENDGAGIYVKVSMDGAPYLRKIDLKVYGGYTQLLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARVYAVCWLAYLIWNYNSEAGDGR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01556 208 MobiDBLite consensus disorder prediction 18 67 - -
Lapu7g01556 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 185 IPR003311 GO:0005634|GO:0006355
Lapu7g01556 208 Gene3D - 89 192 - -
Lapu7g01556 208 FunFam Auxin-responsive protein 90 191 - -
Lapu7g01556 208 Pfam AUX/IAA family 46 186 IPR033389 -
Lapu7g01556 208 ProSiteProfiles PB1 domain profile. 95 182 IPR000270 GO:0005515
Lapu7g01556 208 SUPERFAMILY CAD & PB1 domains 86 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01556 Lapu-Chr7 31021839 31024043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01556 98 186 B3 DNA Binding Superfamily AT2G46530 38.202 2.41e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lapu7g01556 AUX_IAA 6.9e-52 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01556 K14484 - gmx:100527777 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01556 7 31021839 31024043 Lapu7g01556 7 31021839 31024043 ECH